Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00288 ATGAAAAGCCGGCTATCAAGgGACTTCTTGAAAACATGTGAGAGGTGCTGGCTTGGTTTAGAGAATGAAACAAGTCTTATTGTTCAGAGGAGAGGAGAAGAAAAACCTTTCACGATGGCGTTGCAAGGAAAGCTAGATAGATTCAAAAAGCAGCAAGAGAAATGTGCATCAACGCTATCGAGCATAGCAGCAAGCAAAGCTGCATCTTCTGCTGTGCAAAGTCCTATTGTTCCTGTCAAATTTTCAAATGATACGGAGAGGCTTCAACACATTAATAGTATACGTAAAGCTCCTGTTGGAGCTCAGATGAAGCGTGTTATTGATCTCCTTTTTGAGACTCGGCAGGCTTTAACATTGGAGCAAATAAATGAAACATGTCATGTGGACATGAAAGCTAACAAAGATGTTTTTGACAATATGAGGAAAAATCCAAAAGTAAGATATGATGGAGAAAGATTCTCTTACAAGTCGAAACACTCCCTTCGGGACAAAAAAGAGCTTCTTTTCCTGATACGCAAATTTCCCGAGGGCATTGCTGTTATTGATTTAAAGGATTCATACCCAACTGTGATGGAGGACTTACAGGCTTTGAAAGCTGGCAGGGAGATTTGGCTGCTGTCCAACTTTGATTCACAGGAAGACATTGCTTACCCTAATGATCCTAAAGTGCCCATTAAGGTGGATGATGACCTAAAGCTAGCTTTTCGTGATATTGAATTGCCTCGTGATATGCTTGATATAGAGAGGGATCTCCAGAAAAATGGAATGAAGCCTGCTACTAACACTGCAAAGAGGAGAAGTGCAGCACAAATGGAAGGCATTTCATCCAAGCCTAAacctaagaagaagaagaatgaaatcACCAAGAGGACCAAGCTGACTAATGCCCATCTTCCGGAGCTTTTTCAGAACTTAAAGAACTGA 924 0.4015 MKSRLSRDFLKTCERCWLGLENETSLIVQRRGEEKPFTMALQGKLDRFKKQQEKCASTLSSIAASKAASSAVQSPIVPVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLFETRQALTLEQINETCHVDMKANKDVFDNMRKNPKVRYDGERFSYKSKHSLRDKKELLFLIRKFPEGIAVIDLKDSYPTVMEDLQALKAGREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKLAFRDIELPRDMLDIERDLQKNGMKPATNTAKRRSAAQMEGISSKPKPKKKKNEITKRTKLTNAHLPELFQNLKN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00288 307 Pfam TFIIE beta subunit core domain 101 160 IPR003166 GO:0006367
Tsu05g00288 307 PANTHER BNAA02G21830D PROTEIN 39 306 - -
Tsu05g00288 307 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 39 306 IPR016656 GO:0005673|GO:0006367
Tsu05g00288 307 Pfam TFA2 Winged helix domain 2 162 219 IPR040501 -
Tsu05g00288 307 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 87 162 IPR003166 GO:0006367
Tsu05g00288 307 MobiDBLite consensus disorder prediction 255 307 - -
Tsu05g00288 307 MobiDBLite consensus disorder prediction 255 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00288 Tsu-Chr5 2145228 2151373 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00288 K03137 - gmx:100788089 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00288 05 2145228 2151373 Tsu05g00288 05 2145228 2151373 ECH
Tsu05g00288 05 2145228 2151373 Tsu02g00492 02 4096892 4099916 PCT