Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00492 ATGGCTTTACAACAACAATTAGATAAGTTCAAGAAACAGCAAGAAAAGTGTCAATCAACGCTTTCGAGCATTGCAGCAAGTAAGGTTGGTAGCAGAAAACCTAATACTCCTGTAGCTGCTGTATCAACCAATGGAAGAAATGCAGCAACTGGTGTCAAATTCTCAAAAGATACTGAGAGGCTTCAGCATATTAACAGTATACGGAAAGCCCCCGTAGGTGCTCAGATGAAGCGTGTTATCGATCTATTGCTTGAGACACGACAAGCGTTTACACCAGAGCAAATAAATGAAGCGTGCTATGTTGACATGGGGGCTAACAAagatgtttttgacaatctgaGGAAAAACCCAAAAGTAAACTATGACGGGCAACGGTTCTCTTACAAGGCAAAGTATGGCCTTAAGGACAAAACTGAGCTTCTTCAACTGATACGTAAGTATCCAGAGGGCATTGCTGTTTTTGACCTAAAGGATGCTTACCCCACTGTGATGGAAGACATGCAGGCTTTGAAAGCTGCAGGGCAGATTTGGCTGCTCTCCAACTTTGATTCGCAGGATGACATTGCATACCCGAATGACCCCAAAGTGCACATCAAGGTGGACAATGACCTAAAAGAGCTATTTCAGAAAATTGAGTTGCCTCGTGATATGATTGATATAGAGAAGGATCTTCAAAAGAATGGAATGAAGCCTGCTACCAACACTGCAAAGAGGAGGAGTGCAGCACAAATTGAAGGGATCTCTTCCAACAAGCCCAagcctaagaagaagaagagtgaaaTTAGCAAGAGAACCAAGCTGACCAATGCCCATCTTCCGGAGCTTTTTCAGAACCTTGAGTAA 843 0.4116 MALQQQLDKFKKQQEKCQSTLSSIAASKVGSRKPNTPVAAVSTNGRNAATGVKFSKDTERLQHINSIRKAPVGAQMKRVIDLLLETRQAFTPEQINEACYVDMGANKDVFDNLRKNPKVNYDGQRFSYKAKYGLKDKTELLQLIRKYPEGIAVFDLKDAYPTVMEDMQALKAAGQIWLLSNFDSQDDIAYPNDPKVHIKVDNDLKELFQKIELPRDMIDIEKDLQKNGMKPATNTAKRRSAAQIEGISSNKPKPKKKKSEISKRTKLTNAHLPELFQNLE 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00492 280 Pfam TFA2 Winged helix domain 2 135 192 IPR040501 -
Tsu02g00492 280 Pfam TFIIE beta subunit core domain 74 132 IPR003166 GO:0006367
Tsu02g00492 280 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 60 135 IPR003166 GO:0006367
Tsu02g00492 280 MobiDBLite consensus disorder prediction 228 280 - -
Tsu02g00492 280 MobiDBLite consensus disorder prediction 228 247 - -
Tsu02g00492 280 PANTHER BNAA02G21830D PROTEIN 1 279 - -
Tsu02g00492 280 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 279 IPR016656 GO:0005673|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00492 Tsu-Chr2 4096892 4099916 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00492 K03137 - gmx:100802433 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00288 05 2145228 2151373 Tsu02g00492 02 4096892 4099916 PCT