Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00283 ATGTTTCGTTCTGCAAAATGGAAGAGTGAGAAGAATAGAATTAAAGCTGTTTTTAAGCTTCATTTCAATGCCACTCAGGTGTTACAATCTGGGGTGGATACATTGGTGTTGTCAATAGTTCCTGGTGACATTGGAAGACCAactaagagattagagaaaGCTACGGTTCGAGATGGAAATTGTCGGTGGGAGAATCCGGTATTCGAAACAGTAAAGTATTTTCAAGATCCCAAGACTGGGAAAATCGGCgacaaaatatatacttttttgcTTTCAACgGGGTTATCGAAAGCGAGTGCCGTCGGGGAGGTTTCTATTAATTTTGCCGATTATGTTGATTCCACAAAGCCGTCGTCTGTCTCTCTTCCCGTCAGAAATTCTCATTGCGATGCTGTTTTACATGTATCTATCCAAAGGCTGCAAGATAAGGGAGATCAAATTCAAAGAGAGGAAGATGAATGTGAAGATGCCAAAGTAAAATTTGATGATAGTAGCTTAAGGAACAAGCTAAGCAATGGCGATACTGATGAAAACACTAAAAGTTATTCTTCTGAAGATGTTTCTACCAAACCAATCATCAATAGGACATCTAGTGTATCCGACACTACATTGTCAAGTTCCGATGACAGCTCTGGAGTCGATACTCCCTTTGAAATTGGATTGAGAAAAACAAACATCAACCGCACCACAAACCAGATTGTTCCGGTTATGCACTGTGCCGCAAAACCTCAAAATCCTGATGGCAATACCTCAACATCAATGCATGATTTACATGAGAGATCACAATGGGGTTGGTCATCTAGCTCAGAGCTCGGGTTAAGTACGGGCGATTCAACAAATGGTTCTCATAATTCCCTTTCAAAGGAAGCGTCACAAGAGGAATCTCATTCGGAGATTGAGAGACTCAAAGCTGAACTTGCAGCTTTGGTGAGGCATGTAGATGTGTCGGACATGGAACTACAGACCCTTAGGAAGCAAATTGTAAAGGAAAGCAAAAGAGGGCAGGATCTGTCAAAGGAAATCATTATCTTGAAAGACGAAAGGGATGCACTAAAGGCAGAATGTGATAATATCAGGTCTTTCCATAAACGCATGGACGATGCCAAAGTGAGAAACAGGTCACAGTTGGAAAATGGAAATCATCATGCTTTTGTCGACGAAATAAGACAAGAATTGAGTTATGAGAAAGACACAAATGCAAATCTCCGATTACAGTTAAAGAAGATGCAAGAATCAAATGCTGAACTGGTCCTTGCTGTGCAGGATTTGGAAGAAATGTTGCAGCAGAAAAATAGCGATATGTGTAAGTGTAATAATTCCAATAAACACGAAAATGATCAAAATTCCCAAGAGTTAGAGATGAAACTCTCAAAATGTGAAacagatgatgatgaagatcaGAAAGCATTGGACGAGCTTGTCAAGGAGAAGAGTGACGCCAAGGAGACGCACTtgcttgagaaaaaaataatagaccTCTATGGTGAAATTGAAATGTATAGGAGAGACAAAGAGGAGTTAGAGATGCAGGTAGAACAGATTGCACTCGACTATGAGATATTGAAACAGGAAAACCACAGCATTGCGAATAAGTTAGAGCAAAGCCAATTGCAGGAACAGTTAAACATGCAATGTGAATGTTCAAATCCTCCGGCTGCTATGAATGATATTGAAACTCACATTGAAAATCTGGAAAATGAACTCAAGGAACAGTCAGAAGATTTCTCAAATTCTCTAGCTACCATTAAGGTACTGGAAACTCATATCAGGAGATTAGAGGAGGAAATGGAGAAACAAGCACAAGGATTTGAAGCTGATATAGAAGCGGTGGCACGTGAAAAAATTGAGCAAGAGCAAAGAGCTATCCAAGCCGAGGAAACTCTACGAAAGACAAGACAAAAAAATGCTAATACTGCCGAGAGGCTTCAAGAGGAATTCCAAAGACTCTCGATGCAAATGACTTCAACATTTGATGAAAATGAGAAGGCTACCATGAAAGCATTGACAGAAGCAAGTGAACTACGTTTGCAGAAAAATCTAGTGGAAGGAATGCTGCATAAAGTCCAAGAAGAGCTTCAATCAACTAAAGCCGATTATGAGGTAAAACTGAATGAACTTTCCAATCAAATAGATACAATGACAGTTCAGATACAGCAGATGGTTGCGGAAATCGAAGACAAGTCCAAGCAGCTTGAAAATCAGAAGAAGTTTGGAGAACAAGTTCATAATGATTTCTCGGAGGAGATTGAGATACTAAAAGCTGAGAATGAAAAGCTTACGATGGAGATTTCACGCTTAAGTGAACAAGTAGAAGGAAAAGAAATCTTACAAACTGACTTGGAACTAATGAGAAAATCAATCGAGGAATATGAAACACTGTTGCATCAAGGAACTGTGGAAAGAAATGAACTTGTGAGTACAATTGCATCATTGAAGAAGGAAGCGGAGCATACACTTAATGAGCTAAATAAGATGCAAAATCAGAAGGATGAAAAAGAAGCAGAAGCTAGACTCTTGAAGTCAGAGTTGGAAGCTATTAGAGCTCAATGTAGTGATTTGAAACAGTCACTTTTTGAGGATGAGGCTGAGAAAGAAAAACTAAGGAAGCAAATTTCTCAGCTAAAGAGCGAAATAAAGAAGAAGGGCGATGCATTAACCAGCATTGAGAAGAGGTTCAGAGATAGTAATGGCCGCAACCAACTTTCTGACGGTACTAAAACCAGTCCAATCAGCAAAAAAACTGCTTCTAGTCCTCAGAATTCAAAAGAAATGGCAAGTCTgcgagagaaaataaaaatgctcGAGGGTCTGATAAAGTCAAAGGAAACTGCCTTGGAAACTTCTACTACTTCATctatgaagaaagaaaaggagCTCCAGAGCAGAATTGTGGAGCTGGAGAACAAAGTAGAGGAAGTTAATCGGAATTTTACTTTACAAGAGGATAGAAGTGTAACCGATTCAAACGAGATATCGGAAGAATTAAAGAACAGACTGGAACAAGCTGACAACAATCTTAGTGATGTATTGACTGAATTGTCGTCATTGAAGGAAAGAAACAAATCGATGGAAAGCGAACTCAAAGAGATGCAAGAGAGATACTCAGAAATGAGTCTGAAATTCGCCGAGGTAGAAGGTGAAAGACAAATACTTGTTATGACTGATAGGGTGCCGACCAGGCAAAACCTTCTTAGGCGTAGGGTGATTAGGGATCCTAGTGGTGCTTTATGCGCCTTTTGTGCGCCTAGAGGTGTCTTCCAAGGTTTCCTTGCTCTTGGTTTGGGTAGGAAGAATAGGTTAAGGTGGTTGTTAATATGGCACGCTACTGTTTGGACAATTTGGAACTCTCGGAATGATATCATCTTTGCAAGAGGAACTGTTTCTGTCGAATCCTTGgtggataagTCATTCATGCATAAATTAATTTCTCTAAGATCCAACAAACATCCCCTTCATGGCCCTACCACTCTTCTCTTCCTCCTCATCTTCCTCACTGCTGCCTTCATCTCTACCCTCTGGTCTACGCTTTCTACAACTAACATCAAACCAACAACAAACACTATTGCAAATCAAACCTTAGTACCACCAAATGTTTCTTCAAATTATGATAAAACCATTGAAACAATAAAACAGTCCAAAAAGTTTCAGCCAACGATACTGAATTGTAgcattttcaatttcaaccaaACATGTTCAAGCAATTATCCAACAACAACGTTGGAAACAGAGAGAAACTCTGCGGTGTGTCCGGAGTATTTTCGATGGATACACGAGGATTTAAAGCCATGGAAGGAGAAAGGAATAAGCAGAGAAATGGTTGAAATGGCAAAGAAAACGGCACATTTTAGGTTGGTGGTGAAAAATGGAAAAGGGTATTTAGAAAAATATCAAGAATCAATACAAACGCGTGATGTTTTCACAGTTTGGGGCATTTTGCAATTACTGAGAAAATATCCTGGTAAGGTGCCAGATCTAGAACTCATGTTTGATTGTAATGATAAGCCCGTGGTGTCAATGGGCTTATATGACGGACCCAATATTATGGGTCCGCCAGCTGTGTTTGGTTATTGTGCTGATTGGTGGTCGCAGGATATTGTTTTCCCTGATTGGTCTTTCTGGGGTTGGGCTGAGATTAATATAAGGCCTTGGGAAAATCTGCTGAAGGATATAAAAAAAgggaataaaaagattaaatGGAGTGACAGAGAACCTTATGCTTATTGGAAAGGAAATCCTTTTACTGCCCTAACACGACTAGATCTCCTCAATTGTAATGTTTCAACCACACACGATTGGAATGTCCGTTTATTTACGCAGGATTGGATTAAAGAGTCGGAACAAGGATTCAATCACTCGAACTTGGCAGACCAATGTACATATAGatacaaaatttatattgaagGATACGGATGGTCTGTGAGTGAGAAATACATTCTAGCCTGTGATTCTCCTACACTACTCGTGAAGCCTCGTTACTACGATTTCTTCACAAGAAGCTTACAGCCATTGCAACATTATTGGCCTATAAAGGAAAATGACAAATGCAAATCCATCAAATATGCAGTTGATTGGGGCAATAATCATCAGCAAAAAGTACAAGAAATTGGTAAAGCGGGGAGCAAGTTTATACATGAAGAACTCAGCATGGATTACATTTATGACTACATGTTCCATTTACTAAATGAATACGCAAAGCTTCTCAAGTTTGAGGCAAGAGTGCCCGAAGGAGCTGTGGAGCTGTGCCCGGAAACCATGGCTTGCAATAGATCACATTGGTCGGAGAAAGAATTTATGAGTGAATCCATGGTTAGGGAGCCTTCTACAAAAGATCCGTGCTCCTTGCCTCCTCCATTTGAGCCCTCATCGCTTAGGATTTTCTACGCAACGAAACAAAATTTAATCAACCGAGTTGAGAGGTGGGAAAATGACTATTGGAAAAATAACCAATGA 4950 0.3861 MFRSAKWKSEKNRIKAVFKLHFNATQVLQSGVDTLVLSIVPGDIGRPTKRLEKATVRDGNCRWENPVFETVKYFQDPKTGKIGDKIYTFLLSTGLSKASAVGEVSINFADYVDSTKPSSVSLPVRNSHCDAVLHVSIQRLQDKGDQIQREEDECEDAKVKFDDSSLRNKLSNGDTDENTKSYSSEDVSTKPIINRTSSVSDTTLSSSDDSSGVDTPFEIGLRKTNINRTTNQIVPVMHCAAKPQNPDGNTSTSMHDLHERSQWGWSSSSELGLSTGDSTNGSHNSLSKEASQEESHSEIERLKAELAALVRHVDVSDMELQTLRKQIVKESKRGQDLSKEIIILKDERDALKAECDNIRSFHKRMDDAKVRNRSQLENGNHHAFVDEIRQELSYEKDTNANLRLQLKKMQESNAELVLAVQDLEEMLQQKNSDMCKCNNSNKHENDQNSQELEMKLSKCETDDDEDQKALDELVKEKSDAKETHLLEKKIIDLYGEIEMYRRDKEELEMQVEQIALDYEILKQENHSIANKLEQSQLQEQLNMQCECSNPPAAMNDIETHIENLENELKEQSEDFSNSLATIKVLETHIRRLEEEMEKQAQGFEADIEAVAREKIEQEQRAIQAEETLRKTRQKNANTAERLQEEFQRLSMQMTSTFDENEKATMKALTEASELRLQKNLVEGMLHKVQEELQSTKADYEVKLNELSNQIDTMTVQIQQMVAEIEDKSKQLENQKKFGEQVHNDFSEEIEILKAENEKLTMEISRLSEQVEGKEILQTDLELMRKSIEEYETLLHQGTVERNELVSTIASLKKEAEHTLNELNKMQNQKDEKEAEARLLKSELEAIRAQCSDLKQSLFEDEAEKEKLRKQISQLKSEIKKKGDALTSIEKRFRDSNGRNQLSDGTKTSPISKKTASSPQNSKEMASLREKIKMLEGLIKSKETALETSTTSSMKKEKELQSRIVELENKVEEVNRNFTLQEDRSVTDSNEISEELKNRLEQADNNLSDVLTELSSLKERNKSMESELKEMQERYSEMSLKFAEVEGERQILVMTDRVPTRQNLLRRRVIRDPSGALCAFCAPRGVFQGFLALGLGRKNRLRWLLIWHATVWTIWNSRNDIIFARGTVSVESLVDKSFMHKLISLRSNKHPLHGPTTLLFLLIFLTAAFISTLWSTLSTTNIKPTTNTIANQTLVPPNVSSNYDKTIETIKQSKKFQPTILNCSIFNFNQTCSSNYPTTTLETERNSAVCPEYFRWIHEDLKPWKEKGISREMVEMAKKTAHFRLVVKNGKGYLEKYQESIQTRDVFTVWGILQLLRKYPGKVPDLELMFDCNDKPVVSMGLYDGPNIMGPPAVFGYCADWWSQDIVFPDWSFWGWAEINIRPWENLLKDIKKGNKKIKWSDREPYAYWKGNPFTALTRLDLLNCNVSTTHDWNVRLFTQDWIKESEQGFNHSNLADQCTYRYKIYIEGYGWSVSEKYILACDSPTLLVKPRYYDFFTRSLQPLQHYWPIKENDKCKSIKYAVDWGNNHQQKVQEIGKAGSKFIHEELSMDYIYDYMFHLLNEYAKLLKFEARVPEGAVELCPETMACNRSHWSEKEFMSESMVREPSTKDPCSLPPPFEPSSLRIFYATKQNLINRVERWENDYWKNNQ 1649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00283 1649 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 6 1056 - -
Tsu05g00283 1649 Coils Coil 554 659 - -
Tsu05g00283 1649 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Tsu05g00283 1649 Coils Coil 490 538 - -
Tsu05g00283 1649 Coils Coil 334 354 - -
Tsu05g00283 1649 MobiDBLite consensus disorder prediction 244 288 - -
Tsu05g00283 1649 Coils Coil 801 891 - -
Tsu05g00283 1649 MobiDBLite consensus disorder prediction 165 217 - -
Tsu05g00283 1649 Coils Coil 924 944 - -
Tsu05g00283 1649 MobiDBLite consensus disorder prediction 184 213 - -
Tsu05g00283 1649 Pfam Glycosyl transferase family 90 1246 1641 IPR006598 -
Tsu05g00283 1649 SMART cap10 1321 1570 IPR006598 -
Tsu05g00283 1649 MobiDBLite consensus disorder prediction 888 925 - -
Tsu05g00283 1649 Coils Coil 399 433 - -
Tsu05g00283 1649 Coils Coil 137 160 - -
Tsu05g00283 1649 MobiDBLite consensus disorder prediction 165 183 - -
Tsu05g00283 1649 MobiDBLite consensus disorder prediction 898 924 - -
Tsu05g00283 1649 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 6 1056 - -
Tsu05g00283 1649 Coils Coil 985 1047 - -
Tsu05g00283 1649 MobiDBLite consensus disorder prediction 240 298 - -
Tsu05g00283 1649 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 145 IPR019448 -
Tsu05g00283 1649 Coils Coil 956 983 - -
Tsu05g00283 1649 Coils Coil 685 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00283 Tsu-Chr5 2099941 2111632 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00283 - - gmx:100792602 1418.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00283 05 2099941 2111632 Tsu05g00283 05 2099941 2111632 ECH
Tsu05g00283 05 2099941 2111632 Tsu02g00484 02 4015185 4020328 PCT