Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00484 ATGTTCAGATGGAGGAGTGACAAAAATAAAGTCAAAGCTATTTTCAAACTCCACTTTCATCTCACTCAGgTGGTGCAATCTGGTGTGGATTCATTGGTGTTGTCTATAATTCCTGGAGATAATGGAAAACCAACTACAAGATTAGAGAAAGCTATAGTAACTGATGGAATTTGTAAATGGGAGAATCCTGTTTATGAAACTGTTAAATTTGTTTATGATACTAAGAATGGCAAATTTActgaaaaaatttattattttgttgtttcaacGGGGTTATCAAGAGCAAGTATTTTTGGGGAAGTTTCTATagattttgctgattatgcagAAGCTACAAAGATTTCTTCAGTTTCTCTTCCTATCAAGAATTCACATTCTGATGCTGTATTGCATGTATCAATCCAGAGATTACaagaaaataatgataaaagAGAGGAAGAGGAATGTGAAGATACTAAACTAAAACCGAATGATAGGAGCTTAAGGACCTATTTAAGCAATGGAGATCTTAATGGATGCACTAAAAGTGATTCTTCTGAAATTTCACAGGATGTGTCTGCTAATGCAAACACAGATAGATCTGGATTGAGTGTTGATTGTAGGACATCTAGTGGATCTGACATTACATTGTCAAGTTCCGATGGAAGCTCTGGACTTGATACTCCCCGAGAACTTGGACTAAGAAATACTATCATCCAGGTAACTACAAATGGTGTCCCTTCAGAGCCTCAAAAACCTGCTGTGAATGCCTTACCATCAATGTATGATGTACATCAGAGATCATCACATTTCCGGGACCGTTCAGCTAGTTCAGAACATGGTCTGAGTACCGACGGTTCATCACATGGCTCTCATGATGCCCTTCCGAGGGAAAAATCCCATCAGGCATCAgatttagagaatgaaaagctGAAGGCTGAAGTTGCTGCTTTGGCTAGGCAGGTAGATGTGTCAGACATGGAACTTCAGACTCTTCGGAAGCAAATTGTAAAGGAAAGCAAAAGTAGGCAGGAGCTCGCGAAGGAAGTTATCAGCTTGAAAGAGGAAAGAGATACACTCAAGATAGAATGCGAAAATCTCAAGGCTTTACGCAAACGAGTGGATGAAGCCAAAGTGAGTAGCAGGTCACAATTGGGAAGCGGAGATCTTCATACTCTTGTTGAAGAAATCAGACAAGAATTGAATTATGAGAAGGACCTGAATGCAAATCTCAGACTACAGTTAAAGAAGACGCAAGAATCAAATGCTGAACTGGTTCTCGCTGTTCAGGACCTCGATGCAATGTTGGAGCAGAAAAATAGGGAAACACACAGTCATTCCAATAATTACGAACATACTAAAAACTCCCATGATTTAGGGAGAAACACCTCTAATTGTGAAACAGACGATGATGAACAAAAAGAATTGGATGAGCTTGTTAAGGATCAAAGCAGTGCCAAGGAGACACACTTACTTGAGCAAAAAATCATGGATCTCCATAGTGAAATAGAGATGTATAGGAGAGACAAAGACGAGTTAGAGATGCAGATGGAGCAGCTTGCACTGGACTACGAAATTTTGAAACAGGAAAACCATGACTTTGCATATAAGCTGGAACAGAGTGAACTGCAAGAACAGTTAAAAATGCAGTATGAATGCTCTCCTCCTCCTGGCATAGAAGACTTTGAAACACATATCCAGAATCTGGAAAGTCGACTCAAGAAACAGTCGGAAGAATTCTCAAATTCTCTGGAAACCATCAAATCTCTTGAGAACCAAATCTGCAGATTAGAGGAGGAACTGGAGAAACAATCCCAAGGATTTGAAGCTGACTTAGATGCAGTGACACATGACAAAGTTGAGCAAGAGCAAAGAGCCATTCGAGCAGAGGAAGCTTTGCGAAACACCAGACTTAAAAATGCTAATACTGCAGAGAGGCTTCAAGAAGAATTTAGAAGGCTTTCAATGCAAATGGCCACGACATTTGAGGCAAATGAGACGGCTACCATGAGAGCACTGGCTGAAGCAAATGAACTTCGTGTTCATAAAAGACTACTGGAGGAAAAGCTGCATAAAGTCAAAGAAGAGCTTCAGTCAGTCAAAGCTGATTATGAGGTAAAACTGAATGAACTTTCCAACAAAATAGATACCATGACAGTTCAGATGCAACAAATGTTGTCGGAAATTGACGACAAGTCCATGCAACTTGAAAATCAGAAAAAGCATGAGGAACAAGCTGGCAATGATTTCTCCGAAGAGATTCAGTTGCTAAAATCTGAGAATGAAAAGCTTACAGTGGAGATCTTGTGCTTATCTGAGCAagtgaaacaaaaagaaatcttAAGTTCTGACTTGGAACTTATGAAGAAATCACTTGAGGAATATGAGATCCTGTTAAATACTCGAAAGGAAGAAAGAAACGAGCTTGTGAGTACAATTGCTTTGTTGAAGAAGGAAGCAGAACGGTCACTTGATGAGCTAAATAGGATGATGCATCTCAAGGATGAAGAAGAGAAAGTCAGTAGTCTCTTGCATTCAGAGTTAGAAGCACTTAAAGTTCAATATAGTGACCTGAAACGTTCTCTTATTGATGACGAGACTGAGAACAAAAACCTAAGACAACAAATTTTCCATCTTAGAAGTGAACTGAAGATGAAGGACGATGCATTAACCACACAAATTGCTTCAATTCCTCAAAATTCCAAAGAAATGACAGATCTAagtgagaaaataaaaatgctcGAGGATCTGATAAAGTCAAAGGAGATGTCCTTGGAAACATCAGCTTCTTCACTTTTGGAGAAGGAAGGCAAACTTCAATCCAAAGTTGATGAACTGGAGGACAAAGTAGAGGAACTCAATCAAAGAATCAAGGTTGTTGCGGATACAAGTTTTACTTCTATAAATGACAGATCTGAAGAAGTAACAAGTACAATTGAGCATCTCAATGATACTTCATGTATCTCTGAAGAAAACGGGGTTGTAGTGTCATCATCCAAGAGTCATGCACATTTGTCTGAGAAAGAAGTAGAAAAACACACAATGGATAATAATGGCGATGGCAGCCTCAGCAACGTTTTAACTGAACTCTCATCATTGAAAGAAAGAGACGAATCAATGGAAACCGAATTGAAAGAGTTGCAAGAAAGATACTCAGAAATGAGTCTCAAATTTGCAGAAGTAGAAGGTGAAAGACAAAAGCTAGTCATGCAAGTAAGAAGTCTCAAGAATTCTAGGAAGGGTTAA 3225 0.3777 MFRWRSDKNKVKAIFKLHFHLTQVVQSGVDSLVLSIIPGDNGKPTTRLEKAIVTDGICKWENPVYETVKFVYDTKNGKFTEKIYYFVVSTGLSRASIFGEVSIDFADYAEATKISSVSLPIKNSHSDAVLHVSIQRLQENNDKREEEECEDTKLKPNDRSLRTYLSNGDLNGCTKSDSSEISQDVSANANTDRSGLSVDCRTSSGSDITLSSSDGSSGLDTPRELGLRNTIIQVTTNGVPSEPQKPAVNALPSMYDVHQRSSHFRDRSASSEHGLSTDGSSHGSHDALPREKSHQASDLENEKLKAEVAALARQVDVSDMELQTLRKQIVKESKSRQELAKEVISLKEERDTLKIECENLKALRKRVDEAKVSSRSQLGSGDLHTLVEEIRQELNYEKDLNANLRLQLKKTQESNAELVLAVQDLDAMLEQKNRETHSHSNNYEHTKNSHDLGRNTSNCETDDDEQKELDELVKDQSSAKETHLLEQKIMDLHSEIEMYRRDKDELEMQMEQLALDYEILKQENHDFAYKLEQSELQEQLKMQYECSPPPGIEDFETHIQNLESRLKKQSEEFSNSLETIKSLENQICRLEEELEKQSQGFEADLDAVTHDKVEQEQRAIRAEEALRNTRLKNANTAERLQEEFRRLSMQMATTFEANETATMRALAEANELRVHKRLLEEKLHKVKEELQSVKADYEVKLNELSNKIDTMTVQMQQMLSEIDDKSMQLENQKKHEEQAGNDFSEEIQLLKSENEKLTVEILCLSEQVKQKEILSSDLELMKKSLEEYEILLNTRKEERNELVSTIALLKKEAERSLDELNRMMHLKDEEEKVSSLLHSELEALKVQYSDLKRSLIDDETENKNLRQQIFHLRSELKMKDDALTTQIASIPQNSKEMTDLSEKIKMLEDLIKSKEMSLETSASSLLEKEGKLQSKVDELEDKVEELNQRIKVVADTSFTSINDRSEEVTSTIEHLNDTSCISEENGVVVSSSKSHAHLSEKEVEKHTMDNNGDGSLSNVLTELSSLKERDESMETELKELQERYSEMSLKFAEVEGERQKLVMQVRSLKNSRKG 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00484 1074 Coils Coil 612 632 - -
Tsu02g00484 1074 Coils Coil 387 407 - -
Tsu02g00484 1074 Coils Coil 778 801 - -
Tsu02g00484 1074 MobiDBLite consensus disorder prediction 259 301 - -
Tsu02g00484 1074 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 1 1074 - -
Tsu02g00484 1074 Coils Coil 841 868 - -
Tsu02g00484 1074 Coils Coil 415 435 - -
Tsu02g00484 1074 MobiDBLite consensus disorder prediction 184 224 - -
Tsu02g00484 1074 MobiDBLite consensus disorder prediction 184 219 - -
Tsu02g00484 1074 Coils Coil 294 370 - -
Tsu02g00484 1074 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 1074 - -
Tsu02g00484 1074 MobiDBLite consensus disorder prediction 284 301 - -
Tsu02g00484 1074 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 8 143 IPR019448 -
Tsu02g00484 1074 Coils Coil 669 739 - -
Tsu02g00484 1074 MobiDBLite consensus disorder prediction 432 462 - -
Tsu02g00484 1074 Coils Coil 1023 1057 - -
Tsu02g00484 1074 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Tsu02g00484 1074 Coils Coil 747 767 - -
Tsu02g00484 1074 Coils Coil 922 956 - -
Tsu02g00484 1074 Coils Coil 552 600 - -
Tsu02g00484 1074 Coils Coil 810 830 - -
Tsu02g00484 1074 Coils Coil 489 523 - -
Tsu02g00484 1074 MobiDBLite consensus disorder prediction 432 466 - -
Tsu02g00484 1074 Coils Coil 897 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00484 Tsu-Chr2 4015185 4020328 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00484 - - gmx:100819574 1441.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00484 02 4015185 4020328 Tsu02g00484 02 4015185 4020328 ECH
Tsu05g00283 05 2099941 2111632 Tsu02g00484 02 4015185 4020328 PCT