Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00270 ATGGGAGTCCTTTACCTGAAAGCAGCATTAGGATCATCAAGGATGGTTTTGGGGAAAGTAGAGTCAAACAGAAGGGAAGGTGGGTGTTTTAAATTGTCTTCCTCTTCCATTTGCAAAAGAGGGAGAAGAGTTATTGTTGCTTCAGGACCTGCCATTGATGCTCCTGTGGTGATTTCCAATGAACCATTAACAAAAGATGATCTAATTCAATACATGGTATCTGGTTGCAAGCCTAAGGAAGAGTGGAGAATAGGAACAGAACATGAGAAGTTTGGTTTTGAGTTTGATACTTTGCGTCCAATCAACTACAAACAAATATCAGCTCTACTTAATGGCATTGCTTTGAGATTTGATTGGGATAAAATTATGGAAGGTGACAACATCATAGGACTCAAAACTGGGAAGCAAAGCATATCATTGGAAACTGGTGGTCAAATTGAGCTTAGTGGTGCACCTTTCAAAACATTGCATCAGACTTGTGATGAGATTAATTCACACCTCTATCAGGCTAAAACTGTTGCAGAGGAAATGGGAATTGGATTTTTAGGATTAGGTTTTCAGCCTAAATGGAGACAAGAAGACATACCACAAGTGCCCAAGGTGCGTTATGATGTTTTGCGAAATTACTTCACTAAATTTGGATCAAATGGTATTCACACATTATTAATGACATGTTCTGTTCAGGTGAATTTGGATTTCAGTTCTGAAGCAGACATGATTAAGAAAATGCGAGCTAGTCTAGCTTTGCAACCtTTAGCAACGGCCTTATTTGCAAATTCACCTTTCAAGCAAGGACTTCCAAATGGTTATGTCAGCTTAAGAAgCCATGCTTTGGGTCAGGATGACAAACTTCGCACAGGAATGCTCCCATTTGTGTTTTATGATACTTTTGGGTTTGAGCAGTTTATTGATTATGCTCTTGATGTACCGATGGTGTTTATTTatcgaaaaaataaatatattacttGTGGTGGCATGTCATTCCggGACTTCATGGATGGTAAACTCCCTGCTCTTAAGGGTGAAGTGCCAACACTCAGTGACTGGGAAAATCACCTCACAACAATATATCCTGAGGTGAGGCTAAAGAGATACATGGAAATGAGAGGTGCTGATGGTGGCCCTCTTAACATGTTATGTGCCCTGCCTGCTTTTTGGGTAGGTCTACTATATGATGAAGTTTCACTGCATAATGTTCTAGACATGATTGCTGATTGGACCACTGAAGACAGACAATATTTAAGGAATCAAGTTCCTTATACTGGTTTAAGGACTCCATTTCAAGGTAGATTGTTGCAACATGTTGCTGAAGATGTGTTGAAGTGGGCAAAGgATGGCTTGGAAAGAAGATGCTTAAATGAATCCATTTTTCTGGATCCATTGATTGAAGTGGTTGGAACAGGTGTAACACCAGCTGAGAAGCTTTTGGATATGTACAATAACAAGTGGGGAAATAACATAGATCATGTCTTCAGAGAGTGTTGCTACTGA 1491 0.391 MGVLYLKAALGSSRMVLGKVESNRREGGCFKLSSSSICKRGRRVIVASGPAIDAPVVISNEPLTKDDLIQYMVSGCKPKEEWRIGTEHEKFGFEFDTLRPINYKQISALLNGIALRFDWDKIMEGDNIIGLKTGKQSISLETGGQIELSGAPFKTLHQTCDEINSHLYQAKTVAEEMGIGFLGLGFQPKWRQEDIPQVPKVRYDVLRNYFTKFGSNGIHTLLMTCSVQVNLDFSSEADMIKKMRASLALQPLATALFANSPFKQGLPNGYVSLRSHALGQDDKLRTGMLPFVFYDTFGFEQFIDYALDVPMVFIYRKNKYITCGGMSFRDFMDGKLPALKGEVPTLSDWENHLTTIYPEVRLKRYMEMRGADGGPLNMLCALPAFWVGLLYDEVSLHNVLDMIADWTTEDRQYLRNQVPYTGLRTPFQGRLLQHVAEDVLKWAKDGLERRCLNESIFLDPLIEVVGTGVTPAEKLLDMYNNKWGNNIDHVFRECCY 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00270 496 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 72 496 IPR035434 GO:0004357|GO:0006750
Tsu05g00270 496 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 62 496 IPR011556 GO:0004357|GO:0006750
Tsu05g00270 496 SUPERFAMILY Glutamine synthetase/guanido kinase 74 488 IPR014746 GO:0003824
Tsu05g00270 496 PIRSF GCL 51 496 IPR035434 GO:0004357|GO:0006750
Tsu05g00270 496 Gene3D - 48 496 - -
Tsu05g00270 496 Pfam Glutamate-cysteine ligase family 2(GCS2) 115 406 IPR006336 GO:0004357|GO:0042398
Tsu05g00270 496 PANTHER GAMMA GLUTAMYL CYSTEINE SYNTHETASE 72 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00270 Tsu-Chr5 1993906 1999971 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00270 K01919 - gmx:100775188 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00270 05 1993906 1999971 Tsu02g00466 02 3902291 3908884 PCT