Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00466 ATGGCTACAATCTCCCGAGTCGCTTCTTCCTCTCTCCGTCACGACACAATTCCACCGCATAACTTCCATATTCGGAAAACCTCCATTTCCAACACCTTATCTTTCTCTTCAACTGATTCGTTGAAGAGAATTCTTACTTCCGGTGGCCGGAGATTGATTGTTGCTGCTAGTCCTCCAACTGAAGATGCTGTTGTTGCTACTCATCCTCTTACTAAACAGGATCTCATCGATTATCTTGCTTCTGGTTGTAAAACCAAGGATAAATGGAGAATAGGTACTGAACATGAAAAGTTCGGTTTTGAGCTTGGAAGCTTGCGTCCTATGAAGTATGAGCAAATATCAGAATTGCTAAATGGCATTGCTGAGAGATTTGACTGGGAAAAAGTAATGGAAGGTGATAACATCATTGGACTCAAACAAGGGAAGCAGAGCATATCATTGGAGCCAGGAGGTCAGTTTGAACTTAGTGGAGCCCCTCTTGAAACTCTGCATCAAACTTGTGCTGAAGTTAATTCGCACCTCTATCAAgtTAAAGCTGTTGCTGAGGAAATGGGAATTGGATTTTTGGGTATTGGTTTCCAGCCAAAGTGGGAACGCAAAGACATACCTATGATGCCAAAGGGAAGATATGAGATTATGAAAAACTACATGCCTAAAGTTGGTTCTCTTGGGCTTGACATGATGTTCAGGACATGCACCGTACAGGTCAATCTGGACTTCAGTTCTGAAGCCGACATGATCAGGAAATTTCGTGCTGGCCTAGCTTTGCAGCCTATAGCAACAGCTCTTTTCGCAAATTCACCCTTCACAGATGGAAAGCCCAATGGGTTTGTCAGTATGAGAAGCCATATTTGGACTGATACTGATAAGGACCGCACAGGCATGCTGCCTTTTGTTTTTGATGATTCCTTTGgGTTTGAGCAGTACGTTGACTATGCTCTTGATGTTCCAATGTATTTTGTCtatcggaaaaaaaaatatatcgacTGTACTGGAATGACATTCAGGgACTTCTTGGCAGGAAAGCTTCCTTGTATTCCTGGTGAATTACCGACTCTTAATGATTGGGAGAATCATTTGACCACTATATTTCCCGAGGTTAGGCTAAAGAGATATTTGGAGATGAGAGGTGCTGATGGAGGGCCTTGGAGAAGGCTATGCGCTCTACCAGCATTTTGGGTAGGGATATTGTATGATGAGGTTTCTTTGCAACGTGTTTTGGATTTGACAGCAGATTGGACTCTAGAAGAAAGACAAATGCTAAGGAATAAGGTCACCGTAACCGGTCTAAAGACACCATTTCGAGATGGTTTGCTGAAGCATGTTGCCGAAGAGGTTCTAGAGTTGGCAAAGGATGGTTTGGAAAGAAGAGGCTATAAGGAATCAGGATTTTTAAATGCGGTAGCTGAGGTGGTTAGAACAGGTGTTACCCCAGCTGAGAGGCTTTTGGAATTGTATCATGGAAAGTGGGAGCATTCTGTAGATCATGTATTTGAGGAATTGCTTTACTAA 1512 0.4213 MATISRVASSSLRHDTIPPHNFHIRKTSISNTLSFSSTDSLKRILTSGGRRLIVAASPPTEDAVVATHPLTKQDLIDYLASGCKTKDKWRIGTEHEKFGFELGSLRPMKYEQISELLNGIAERFDWEKVMEGDNIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWERKDIPMMPKGRYEIMKNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTDGKPNGFVSMRSHIWTDTDKDRTGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCTGMTFRDFLAGKLPCIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGILYDEVSLQRVLDLTADWTLEERQMLRNKVTVTGLKTPFRDGLLKHVAEEVLELAKDGLERRGYKESGFLNAVAEVVRTGVTPAERLLELYHGKWEHSVDHVFEELLY 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00466 503 Gene3D - 55 503 - -
Tsu02g00466 503 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 9 503 IPR035434 GO:0004357|GO:0006750
Tsu02g00466 503 Pfam Glutamate-cysteine ligase family 2(GCS2) 122 411 IPR006336 GO:0004357|GO:0042398
Tsu02g00466 503 SUPERFAMILY Glutamine synthetase/guanido kinase 81 501 IPR014746 GO:0003824
Tsu02g00466 503 PIRSF GCL 57 503 IPR035434 GO:0004357|GO:0006750
Tsu02g00466 503 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 69 503 IPR011556 GO:0004357|GO:0006750
Tsu02g00466 503 PANTHER GLUTAMATE--CYSTEINE LIGASE 9 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00466 Tsu-Chr2 3902291 3908884 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00466 K01919 - gmx:547545 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00466 02 3902291 3908884 Tsu02g00466 02 3902291 3908884 ECH
Tsu05g00270 05 1993906 1999971 Tsu02g00466 02 3902291 3908884 PCT