Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00249 ATGAATGGTACTCCAAAGCATGAACGCCGGTGGGCGTCCGACACCCTTCTGGCGAATATAACTGTTGGTACCAATACTTCACCGGGAACGGACTCCAATTCCGACACCGACGAGTATGTCGAGGTCACTCTCGATATTCACAAAGATGACACCGTCGTTCTCCGCAGCATTGAACCACTCTCTACCGTTAACATCGACGCCGGAGTCAGCACCACCGGAAATGAAACCACGACATCAGCTACAAGGCCTTCAATGACCAGGAGAAACTCTACCAACATGTTGCGACGTTTATCGCATGAGATGAAAGCCGAAGCGGTTGCCAAGGCTAAACAGTTTTCACAAGAGCTTAAGGCGGAACTGCGGCGATTCTCATTGAGTCGTAGCGGGTCTGAAACGGCGTTAACGGCTCGAGATCTTAGGAAACAACGTGCTCAGCATGATCGAAATCGTTCCGGTGCGAAGAAAGCACTCCATGGATTGAAATTTATTAGCAGTAAATCCAATGGTGTTGATGCATGGAACGAGATGCAGAGCAATTTCGATAAATTTGCCAAAGACGGTTTTCTCTATCGGAACGATTTTGCACAATGCATTgGTATGGGAGATTCTAAGGAGTTTGGTATGGAAATATTCGATGCCTTGAATCGTAGACGAAGATTAAAGGTTGAAAGGATAAATAGAGATGAGTTTCGCGAATTCTGGTCGCAAATTACCGATCAAAGTTTTGATTCGCGGCTCCAAATCTTCTTTGACATAGTGGACAAGAACGAAGATGGTAGAATCACGGAAGAAGAAGTGAAAGAGATCATTGTGCTAAGTGCTTCAGCAAATAAGTTGTCCAGATTGAAGGAACAAGCTAAAGAATATGCAGCTCTAATCATGGAAGAGTTAGACCCTGAAAGACTTGGTTACATCGAGCTATGGCAATTGGAGACACTTCTATTACAAAAGGACGCATACCTCAACTACAGCCGGGCTCTAAGCTTCACAAGTCAAACTTTGAGCCAGAACCTACAAGGACTAAGGAAGGAAAGTCTGATACGTAGGATGACCCGCAAGTTGCTCTACTATTTGCAAGAAAATTGGAGGAGACTTTGGGTTTTAACACTGTGGATTTCCATAATGATTGGGCTGTTTACGTGGAAGTTTATCCAGTACAAGCGATTTGATGCGTATTATATCATGGGTCATTGTCTCCTCATGGCTAAAGGTGCGGCTGAGACCCTGAAGTTCAATATGGCTCTTATTCTCTTGCCTGTATGCAGAAACACCATAACTTGGCTTAGGTCTACCAAGCTGGCTTACATTGTACCTTTTGATGATAACATCAACTTTCATAAGACAATTGCTGCGGCCATAGTCATTGGAGTTACACTTCATGTCGGGAATCACCTTGCATGTGATTTTCCAAGACTTGTAAattcctctgaagatgagtATAAGAAGTATTTAAATGGCGCATTTGGTGATCATACACCCAGTTACAGAGACCTTGTTAAAGGGATTGAGGGTGTGACTGGAATTTTGATGGTTGTTTATATGGCCATTGCATTTATACTTGCAACAAACTGGTTCAGGAGAAATCTCATTAAGCTACCTAAACCATTTAATAGGCTTACAGGTTTCAATGCCTTCTGGTATTCACACCATTTATTTGCCATTGTCTATATCCTTCTCATCATTCACGGTGTAAACCTTTACCTCGTGCGCAAATGGATCCATCAAACAACATGGATGTATCTTGCAATTCCAATTTTACTTTATGCAGGAGAAAGAACACTCAGATTCTTCCGTTCTGGTTTTTACACAGTGCATATTATAAAGGTTGCAATCTATCCTGGAAATGTTCTCACATTGCAAATGTCAAAGCCACCCAAATTTCGTTACATGAGCGGACAATACATGTTTGTACAATGTCCTGCTGTTTCTCCATTTGAGTGGCATCCATTTTCTATTACCTCAGCCCCTTGTGATGACTACCTGAGTGTTCACATCCGGCAACTGGGAGATTggacttatgagcttaaaaggGTATTCTCTGAGGCCTGTGAGCCTCCCTTAGCCGGGAAGAGCGGTCTTCTCAGGGCTGATGAAACCACAAAGAAAAGTTTACCCCAGCTAAGGATAGACGGACCTTACGGTGCGCCAGCACAGGACTATGCAAAATATGATGTCCTGTTACTTGTGGGTCTTGGGATAGGAGCAACACCTTTTATCAGCATCCTAAAAGATCTTCTCTATAACATTGTCAAAATGGAGGACCAAGCGgaaTCAGTTCCTGTAGGTTCAAACTCCACCGCCAGGAGCTCAGATCCACTGTTTCTTAATAATTTTCCTCCTAAACGGAAGAAAACGCTGAAAACTACCAACGCTTATTTCTACTGGGTAACAAGAGAACAAGGTtcttttgattggtttaaagGGGTCATGAATGAAGTTGCTGAAATAGATAAGAGGGGAGTTATTGAGATGCACAACTACTTAACCAGTGTATACGAGGAAGGAGATGCCAGATCTGCCCTCATCACCATGTTGCAAGCCCTTAACCATgcaaaaaatggagttgatatTGTTTCTGGGACTCGGGTGCGAACTCATTTTGCAAGGCCTAATTGGAAGAAGGTTTTCTCTAAAATATGTTCTAAGCATTGTAATAAACGAATAGGGGTATTTTATTGTGGAGCACCAGTTTTGGCCAAAGAATTGAGCAAGCTTTGTTTCGAGGTCAACAAAAAAGTTTTATTAATCTCGGCATCCATATTACAACTACGAAATCTAGAGATCAAGTTAACATCAGCAACATTGAATCAAACCAGTTATAAAGCTAATTCATCGTCGCCTTCATTCAACGCAACAATCATGGCATATTTCAGTATTTGGAACCCAAATTTCGGTGGAATATTCAATTATGAGTATAGCAATATGAAAGTATTATATTCAGGTGTTAAAGTTGGTATTACAAAAATTCCTAATGATAGAGTGAACCAAAGAGAAACCAAACATGTTAATGTTACAGTGATTGTGAAGTTTGCTAAGGTAATTGTTGATGAGAAGAATGTGAATTTTTCTAGTGATATTAATTCAAGGATGTTGAATGTTACAGGTTATGTGAGATTTAATGGTATTGTTGAATTGATGAAGATTGTTCATAAGAGAAAGATTATAGATATGGCTTGCATTATGAATCTCAACTTGACATCGCAAGCAATTCAAGGAATTCATTGTTAA 3228 0.4015 MNGTPKHERRWASDTLLANITVGTNTSPGTDSNSDTDEYVEVTLDIHKDDTVVLRSIEPLSTVNIDAGVSTTGNETTTSATRPSMTRRNSTNMLRRLSHEMKAEAVAKAKQFSQELKAELRRFSLSRSGSETALTARDLRKQRAQHDRNRSGAKKALHGLKFISSKSNGVDAWNEMQSNFDKFAKDGFLYRNDFAQCIGMGDSKEFGMEIFDALNRRRRLKVERINRDEFREFWSQITDQSFDSRLQIFFDIVDKNEDGRITEEEVKEIIVLSASANKLSRLKEQAKEYAALIMEELDPERLGYIELWQLETLLLQKDAYLNYSRALSFTSQTLSQNLQGLRKESLIRRMTRKLLYYLQENWRRLWVLTLWISIMIGLFTWKFIQYKRFDAYYIMGHCLLMAKGAAETLKFNMALILLPVCRNTITWLRSTKLAYIVPFDDNINFHKTIAAAIVIGVTLHVGNHLACDFPRLVNSSEDEYKKYLNGAFGDHTPSYRDLVKGIEGVTGILMVVYMAIAFILATNWFRRNLIKLPKPFNRLTGFNAFWYSHHLFAIVYILLIIHGVNLYLVRKWIHQTTWMYLAIPILLYAGERTLRFFRSGFYTVHIIKVAIYPGNVLTLQMSKPPKFRYMSGQYMFVQCPAVSPFEWHPFSITSAPCDDYLSVHIRQLGDWTYELKRVFSEACEPPLAGKSGLLRADETTKKSLPQLRIDGPYGAPAQDYAKYDVLLLVGLGIGATPFISILKDLLYNIVKMEDQAESVPVGSNSTARSSDPLFLNNFPPKRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAEIDKRGVIEMHNYLTSVYEEGDARSALITMLQALNHAKNGVDIVSGTRVRTHFARPNWKKVFSKICSKHCNKRIGVFYCGAPVLAKELSKLCFEVNKKVLLISASILQLRNLEIKLTSATLNQTSYKANSSSPSFNATIMAYFSIWNPNFGGIFNYEYSNMKVLYSGVKVGITKIPNDRVNQRETKHVNVTVIVKFAKVIVDEKNVNFSSDINSRMLNVTGYVRFNGIVELMKIVHKRKIIDMACIMNLNLTSQAIQGIHC 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00249 1075 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 599 719 IPR017927 GO:0016491
Tsu05g00249 1075 CDD EFh 225 270 IPR002048 GO:0005509
Tsu05g00249 1075 PANTHER NADPH OXIDASE 28 911 - -
Tsu05g00249 1075 Pfam FAD-binding domain 603 716 IPR013112 GO:0016491
Tsu05g00249 1075 SFLD NADPH oxidase subgroup (NOX) 84 958 - -
Tsu05g00249 1075 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 707 815 IPR039261 -
Tsu05g00249 1075 Gene3D Translation factors 591 681 - -
Tsu05g00249 1075 Pfam Ferric reductase like transmembrane component 404 560 IPR013130 -
Tsu05g00249 1075 SUPERFAMILY EF-hand 173 323 IPR011992 -
Tsu05g00249 1075 Pfam Ferric reductase NAD binding domain 723 906 IPR013121 GO:0016491
Tsu05g00249 1075 Pfam Respiratory burst NADPH oxidase 147 244 IPR013623 GO:0004601|GO:0050664
Tsu05g00249 1075 PRINTS Cytochrome B-245 heavy chain signature 505 528 IPR000778 GO:0016020|GO:0016491
Tsu05g00249 1075 PRINTS Cytochrome B-245 heavy chain signature 728 745 IPR000778 GO:0016020|GO:0016491
Tsu05g00249 1075 PRINTS Cytochrome B-245 heavy chain signature 705 718 IPR000778 GO:0016020|GO:0016491
Tsu05g00249 1075 PANTHER RESPIRATORY BURST OXIDASE2 28 911 - -
Tsu05g00249 1075 Gene3D - 146 262 - -
Tsu05g00249 1075 Gene3D - 714 918 IPR039261 -
Tsu05g00249 1075 CDD NOX_Duox_like_FAD_NADP 606 866 - -
Tsu05g00249 1075 ProSiteProfiles EF-hand calcium-binding domain profile. 241 276 IPR002048 GO:0005509
Tsu05g00249 1075 ProSitePatterns EF-hand calcium-binding domain. 254 266 IPR018247 -
Tsu05g00249 1075 SUPERFAMILY Riboflavin synthase domain-like 602 716 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00249 Tsu-Chr5 1824428 1831505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00249 9 912 Miscellaneous Gene Families AT1G64060 72.258 0.0 1397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00249 K13447 - gmx:100805517 1526.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00249 05 1824428 1831505 Tsu02g00413 02 3450547 3460363 PCT