Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00231 ATGCAAGCATCTCCTCGTGGAATAAAGCGTGTTTCTTCACTGTCTTCTTCCTTTAGCTCAGACTCCGAGTGCTTTTCTTCAGATGACACGGAATTTAGTCATTCAGATATCAACTCAAGATCACAAAGGGTACGTTATTCTCCATTTATAAATACTCTTGAAGCTCTCAAGACTCCAAAATCAACAGAAACAAATGAATTTGAAGCACATGAATTGAACCTATTACGCGCGAAGAATGCTGAGCTTGAAAAATCAGTGTCAGTGTTACGTGCGAAACTCAAGAACAATGAGGAACATGCAATGTCCAAAACTTCGGATTTGATGACACGAATTACCAAGCTCGAACTAGAAGCTAAATCTCTTTGGAACAACAAAGGAAAACTTgaagaaaagataaaatgttGTAGAAATGAAGCATTGAACCAAAAGAAGGAACTCACCAATGAGATTAAGgtcatacaacaaaaatttgaGTCTGTATGCAACAGCAACAAAGAATTGGAAGCTCAGATAGAAAATGAGAGAACAAAAGTTTCACAATATTTGATTAGGATAACAAATTTGGAGGAGAATTTAGCTGAAGCTGTTTCAGATGAACAAAGTCTGCTAAAAGAGAAACAATGTTTCATTCAAAAGATAGAGGATTTGGAATCTCGATGCAGCAAAGCAAACAATTTGGAAGAACAGTTAAGAAATGCATGGTGTGAGATAAACACTTTGCAGAAACAAAAAAGCGAATTAGAGTTACAAAATGATCAAAGCCAAAAGGAATATTCACAGACGATAAAAAAGCTAATTGAAACCATTGATCTAATACATGAAGAGAATAAACATTCCAAAATGAATAAGCAGTTAATGGAAAAGAAAATGGAAGAATTGGCAGAAGGGATTCGGCAGAAAATGGAAGACAATATACACATATTGCATCGGAGGATCCACGTGACAGAAGTACTGAATAACGAAAACAAGGACAGTTGCAAATTAACAAAGCAAAAGTACGAGGAAGAGAACAAAATGCTCGGTAAAAGAATTGCTGATTATGAAGATGAAATTAAGACTTTAAGAGCGAAGGTGTGGAAATTAGAAGACGACGTGAGCAAGGAAGGAGGAGAGAAAATGAATTTGATGAAAACAGTGACACATTTTGAAAGAGAAATGGCGAAATTGGAAAAGAAACTGAAAGATAAAGATGATGAATTGGTTAGCCTTGGGGAGAACAAGAAGGAAGCAATCAGACAACTTTGTTTTTTGGTTGAGTTTCATCGCGATCGTTGTCTCTATCTAAAGGATTTGATGTTAAAGATGAAGGTAAAGCACAAGAAGTGA 1326 0.3514 MQASPRGIKRVSSLSSSFSSDSECFSSDDTEFSHSDINSRSQRVRYSPFINTLEALKTPKSTETNEFEAHELNLLRAKNAELEKSVSVLRAKLKNNEEHAMSKTSDLMTRITKLELEAKSLWNNKGKLEEKIKCCRNEALNQKKELTNEIKVIQQKFESVCNSNKELEAQIENERTKVSQYLIRITNLEENLAEAVSDEQSLLKEKQCFIQKIEDLESRCSKANNLEEQLRNAWCEINTLQKQKSELELQNDQSQKEYSQTIKKLIETIDLIHEENKHSKMNKQLMEKKMEELAEGIRQKMEDNIHILHRRIHVTEVLNNENKDSCKLTKQKYEEENKMLGKRIADYEDEIKTLRAKVWKLEDDVSKEGGEKMNLMKTVTHFEREMAKLEKKLKDKDDELVSLGENKKEAIRQLCFLVEFHRDRCLYLKDLMLKMKVKHKK 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00231 441 Coils Coil 125 264 - -
Tsu05g00231 441 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 354 441 - -
Tsu05g00231 441 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 12 251 - -
Tsu05g00231 441 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 256 355 - -
Tsu05g00231 441 PANTHER COP1-INTERACTIVE PROTEIN 1 354 441 - -
Tsu05g00231 441 PANTHER COP1-INTERACTIVE PROTEIN 1 12 251 - -
Tsu05g00231 441 Coils Coil 283 303 - -
Tsu05g00231 441 Coils Coil 65 99 - -
Tsu05g00231 441 MobiDBLite consensus disorder prediction 17 37 - -
Tsu05g00231 441 PANTHER COP1-INTERACTIVE PROTEIN 1 256 355 - -
Tsu05g00231 441 Coils Coil 372 413 - -
Tsu05g00231 441 Coils Coil 330 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00231 Tsu-Chr5 1688287 1689612 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00231 - - cam:101488584 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00231 05 1688287 1689612 Tsu05g00231 05 1688287 1689612 ECH
Tsu05g00231 05 1688287 1689612 Tsu02g00386 02 3209673 3213157 PCT