Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00386 ATGTCTGCTAAGAAATTGGAGAAGATGGAGGAAAGTCACATTGGTACTAAAACAGAAATTGAAGACATAGTAAAAGGGGTATTGAAACTTATTAAAGATGGCGAACTTGATATGGATGGCACGCCGGAAGAAATTTTGAAGAGGGAACCACTTGCTGAATTggttaaaaatatcaaaaacattaaaaatgaGCTGAATGTATTGGAGAAGGTTGTAGAAGACACAGTTGAAGAAGATAAAAAGCAAAAGATGGCCTACTTCAAACAGCAATGTCAAGATAAAATAGCAGCACCGGTGGAATTCATAGAAAGACAGAAGAGACAAGTTGAAGAAGAATTAAGATCCAATAAACGTGTGTTGAACACTTTAAGGCAAAAAGTAAGTGATTGCGAAAAGCAAATAAGTGATCAACAGAATGAGATCAGTCAACTGGCTGCAAAGAATTTGGAGCAAGAAGACAAATTAGGTAAGTTGGAGAAAGCGAGAAAATCAGAGTGCTCTGCACTCCAACTTGCAAACAGAAAGATTGAAGAAAAGGCAGAAGAGCTTCGTGAAAGCATTGCATCAAAAGATAAGATGGTAGATGATTTGGAACATCAAGTTGAAGACCTGAAAAGAGACCTGGAAGAGAAAGGGAATGAGACCAGCACTTTGCTTGAGAATGTCGAGAATCGTGAGGAAAAGCTTCGCCTGTCAAACCAAAAGCTCCGGGACACAGAACAATTGTTAAGTGAAAAGGAAGAGAGCTTTAGAAAGGTGGAAGAAGAGCTTCAGAAAGTTCAGAGAGAACTTGAAGATAGGAGGAATGCTACTCCAGTAGCAAGAATCACCGCTAACAATGAACCTTATCATGCAACAATTGCAGATATTAAAGTGTGTATCGACAGTGTGAAAATTGGGATAGATACTGCGAGCAAAAAAATTTCCGATGACTGCAATAATCATGAGAACTCCATCGAGAACATCTCTGACAAGCTTCAGGTTGCAAAAGAATATGTCAGTGAGATGAATAGGGAAAAGGAGAAGTTACAGGAAGATAATAAGATTTTGTTGGAGGAGCTGGATGGTAAAAAGGAAGAGGTATTAACTCTGGGGGAGAAGCTTGAGGCAAAGGCAAGAAAGGAGGAATCAGAGAAGACTGAAATAATGGATCTTCAGAGAACATTGAAAGAACAGGAAGATGCATATCAGAAGTTGAATGAAGAATGCAAGGTCAACCTTGAAGATGCAAAGAGAAAGATGGAACAAATGGCAAAAGAGTTTGATGAACGCATTGAGTCAAAAAATAGGATTGTAGCTAATTTGGATCACCATGTTGAAGAACTGATGGAGTTGTTAAAACCGAAGGCATGA 1353 0.3821 MSAKKLEKMEESHIGTKTEIEDIVKGVLKLIKDGELDMDGTPEEILKREPLAELVKNIKNIKNELNVLEKVVEDTVEEDKKQKMAYFKQQCQDKIAAPVEFIERQKRQVEEELRSNKRVLNTLRQKVSDCEKQISDQQNEISQLAAKNLEQEDKLGKLEKARKSECSALQLANRKIEEKAEELRESIASKDKMVDDLEHQVEDLKRDLEEKGNETSTLLENVENREEKLRLSNQKLRDTEQLLSEKEESFRKVEEELQKVQRELEDRRNATPVARITANNEPYHATIADIKVCIDSVKIGIDTASKKISDDCNNHENSIENISDKLQVAKEYVSEMNREKEKLQEDNKILLEELDGKKEEVLTLGEKLEAKARKEESEKTEIMDLQRTLKEQEDAYQKLNEECKVNLEDAKRKMEQMAKEFDERIESKNRIVANLDHHVEELMELLKPKA 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00386 450 PANTHER COP1-INTERACTIVE PROTEIN 1 167 382 - -
Tsu02g00386 450 PANTHER COP1-INTERACTIVE PROTEIN 1 11 60 - -
Tsu02g00386 450 Coils Coil 166 270 - -
Tsu02g00386 450 Coils Coil 375 427 - -
Tsu02g00386 450 Gene3D - 102 280 - -
Tsu02g00386 450 PANTHER COP1-INTERACTIVE PROTEIN 1 381 443 - -
Tsu02g00386 450 PANTHER COP1-INTERACTIVE PROTEIN 1 167 382 - -
Tsu02g00386 450 Coils Coil 319 371 - -
Tsu02g00386 450 PANTHER COP1-INTERACTIVE PROTEIN 1 381 443 - -
Tsu02g00386 450 Coils Coil 99 161 - -
Tsu02g00386 450 Coils Coil 51 78 - -
Tsu02g00386 450 PANTHER COP1-INTERACTIVE PROTEIN 1 11 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00386 Tsu-Chr2 3209673 3213157 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00386 - - mtr:MTR_8g099275 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00231 05 1688287 1689612 Tsu02g00386 02 3209673 3213157 PCT