Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00221 ATGAAATTGTTTACACTCCGGGGGCTGCCATGGATCCCCAGTAATGGTAGTCGTGAAAAGgttGAATTAACAGCTGCAGAAGTAGAGTCTCTTCGATCAGAACTTGCTGATTTAGAAGAGAAGGAAGCTCAATTAAAAGCTCAGTTGGAAAATATTGATGAAATTTTACGATCAGCTCGTCTATCTGGATATTTGTACATCCGAACTAGATGGGCAGCACTTCCGGGTGAAACTCCACCTATTGATGATACCGATGTAGATGACTGGCTTCCTCGTTTCGTTGTTCTTCAGGGTGAATGTCTATTCTTATATTTGTTGTGTACAGACTTAAGTCCTCAAGACTCAACGCTTCTATCTGACATTGTTGAAGTAAACCAATTACCAAGTTTTAAGCGTGAAGATAATGAGATGAGATACGCCTTTTGTATTTTAACTCGACATGGATTACGATATGAATGCTCAAGCAGTTCTAAGATACAGGTGGACTCGTGGTTATCGGCTCTACAATCTGACTGCAAACTCGAATCTGATACATCAACTCCCAATGGTTCAATATAG 558 0.4014 MKLFTLRGLPWIPSNGSREKVELTAAEVESLRSELADLEEKEAQLKAQLENIDEILRSARLSGYLYIRTRWAALPGETPPIDDTDVDDWLPRFVVLQGECLFLYLLCTDLSPQDSTLLSDIVEVNQLPSFKREDNEMRYAFCILTRHGLRYECSSSSKIQVDSWLSALQSDCKLESDTSTPNGSI 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00221 185 PANTHER OS05G0595500 PROTEIN 2 184 - -
Tsu05g00221 185 ProSiteProfiles PH domain profile. 58 173 IPR001849 -
Tsu05g00221 185 PANTHER OS05G0595500 PROTEIN 2 184 - -
Tsu05g00221 185 SUPERFAMILY PH domain-like 52 170 - -
Tsu05g00221 185 Gene3D - 56 180 IPR011993 -
Tsu05g00221 185 Coils Coil 21 58 - -
Tsu05g00221 185 SMART PH_update 59 175 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00221 Tsu-Chr5 1610305 1613165 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00221 - - ccaj:109810881 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00221 05 1610305 1613165 Tsu05g00221 05 1610305 1613165 ECH
Tsu05g00221 05 1610305 1613165 Tsu02g00371 02 3109938 3112726 PCT