Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00371 atgttgaactTGTTTACTCTGCGAAGACTTTCATGGGGGTCCGATACTGGAGGTCAGGAAAAGGTTGAGCTAACAGCTGCAGAATTAGAGTCACTTCGATCGGAGCTTGCTGATTTAGAGGAGAAGGAAGCTCACTTAAAAGCTCAgTTGCAACATATTGATGAAGTTCTGCGATCAGCTTGTCACTCTGGCTATTTACAAATTAGAACTAGATGGACAGCACTTCCGGGAGAACCCCCACCTATAGATGATACTGAAGTAGATGATTGGCTTCCTCGCTTTGTCGTTCTCCATGGAGCATGTATATTCTTATATTTCTTGTCTACAGATATAAGTCCTCAGGACTCAACCCTTCTATCAGATATTCTTGAAGTAGGTAGATTGCCGTGTTTTAAGCGTGAAAATGATGATATTCAACATGccttttatattttaactcGTCTTGGATATCGCTACGAGTGCTCAAGCAATTCTATGATACAGGTGGACTCTTGGTTAACAGCTTTACAAAGTTACAGCAAATTAGAATCCGATAAATCAGTTCGTAATGGTTCGATTGAGATGCAACACGATTGA 576 0.3924 MLNLFTLRRLSWGSDTGGQEKVELTAAELESLRSELADLEEKEAHLKAQLQHIDEVLRSACHSGYLQIRTRWTALPGEPPPIDDTEVDDWLPRFVVLHGACIFLYFLSTDISPQDSTLLSDILEVGRLPCFKRENDDIQHAFYILTRLGYRYECSSNSMIQVDSWLTALQSYSKLESDKSVRNGSIEMQHD 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00371 191 ProSiteProfiles PH domain profile. 59 174 IPR001849 -
Tsu02g00371 191 Gene3D - 55 183 IPR011993 -
Tsu02g00371 191 CDD PH 62 169 - -
Tsu02g00371 191 PANTHER OS05G0595500 PROTEIN 1 187 - -
Tsu02g00371 191 SMART PH_update 60 176 IPR001849 -
Tsu02g00371 191 Coils Coil 22 56 - -
Tsu02g00371 191 PANTHER OS05G0595500 PROTEIN 1 187 - -
Tsu02g00371 191 SUPERFAMILY PH domain-like 61 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00371 Tsu-Chr2 3109938 3112726 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00371 - K00940 gmx:113002366 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00371 02 3109938 3112726 Tsu02g00371 02 3109938 3112726 ECH
Tsu05g00221 05 1610305 1613165 Tsu02g00371 02 3109938 3112726 PCT