Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00201 ATGACCAAACATGAAacatcaccaccaccatcaaaCAGCACCAACCTCGCATCATGTCTTGTAGCCACCATATTCttaatcttcatcttcataaCAATCTTCACACTTTACTTCACACTTTTCAAACCACAAGATCCTAAAATCTCCGTCAGTGCCGTTCAACTACCATCCTTTAACGTCACAAATAACGGCACAACAATCAATTTCACTTTCTCACAATACTCTTCTGTTAAAAACCCTAACAGAGGAACTTTCTCACACTATGATAGTTCATTTCAGCTTCTTTATTATGGAAAACAAATCGGTTTCATGTTTGTTCCCGCTGGGAAGATTAGTTCTCGGAGAACTCAGTATATGGCTGCTACTTTCACTGTTCAGTCTCTTCCTTTGGGCTTGGAGTCAAATGGGCCTGATGGGCTTAAAATGGGGCCCACTATGGAGATTGAATCTACAATGGAGATGGTTGGGAGAGTTAGAGTTTTGCATCTGTTCAGTCATCATGTGGAGGCTAAAGCTGAATGCAGAGTTGCCATTGCTGTATCTGATGGAGCTGTTTTAGGTTTTCATTGTTAA 573 0.3839 MTKHETSPPPSNSTNLASCLVATIFLIFIFITIFTLYFTLFKPQDPKISVSAVQLPSFNVTNNGTTINFTFSQYSSVKNPNRGTFSHYDSSFQLLYYGKQIGFMFVPAGKISSRRTQYMAATFTVQSLPLGLESNGPDGLKMGPTMEIESTMEMVGRVRVLHLFSHHVEAKAECRVAIAVSDGAVLGFHC 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00201 190 Pfam Late embryogenesis abundant protein 76 174 IPR004864 -
Tsu05g00201 190 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 8 190 - -
Tsu05g00201 190 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 8 190 - -
Tsu05g00201 190 SUPERFAMILY LEA14-like 26 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00201 Tsu-Chr5 1462593 1463355 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00201 - - cam:101503027 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00201 05 1462593 1463355 Tsu05g00201 05 1462593 1463355 ECH
Tsu05g00201 05 1462593 1463355 Tsu02g00360 02 3030040 3031655 PCT