Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00360 ATGGCGGATAGACCCATCATCCCCACCACCACCGCCCCCTCCACCACCACCAGACCAAAGAGACCACGACCACCTTCAGGCCGTACCAACCTAGCCTCATGTGTAGTGGCCACAATCTTCTTaattttcatcatcatcgtcatccTCATAGTCTACTACACAGTTTTCAAACCACAAGATCCAAAAATCGCTGTCAACGCCGTTCAACTTCCATCATTCTCCGTCACTAACGGCACCGTCAATTTCACTTTTTCTCAATACGCTTCCGTTAGAAACCCTAACAAAGCTGCTTTCTCTCACTACGACAGCTCACTTCAAATCCTCTATTCCGGCAGTCAAGTTGGGTTCATGTTCATTCCCGCCGGCGAGATCGACGCCGGAAGAACACAGTACATGGCAGCTACTTTCTCTGTTCAGTCTTTTCCGTTGTCAGCACCACCTAATATGGGTCCCACACTGGCGAATGGTGATGGTGTTGGGTTTAACTTTGGGTTGAGAGTTCAACCAACGATGGAGATTGAGACGAAACTGGAAATGGCGGGACGTGTTAGGGTTTTGCATTTCTTCAGTCACCGTGTTAAGGTCAGAACTGGTTGCAGAATCGCCATTGCCGTCAATAATGGTGATCCGATGCTCCAGTCACTAAGATGTGAAGCAAAAGTTTTAAGAGTAGAATAG 678 0.4661 MADRPIIPTTTAPSTTTRPKRPRPPSGRTNLASCVVATIFLIFIIIVILIVYYTVFKPQDPKIAVNAVQLPSFSVTNGTVNFTFSQYASVRNPNKAAFSHYDSSLQILYSGSQVGFMFIPAGEIDAGRTQYMAATFSVQSFPLSAPPNMGPTLANGDGVGFNFGLRVQPTMEIETKLEMAGRVRVLHFFSHRVKVRTGCRIAIAVNNGDPMLQSLRCEAKVLRVE 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00360 225 MobiDBLite consensus disorder prediction 8 23 - -
Tsu02g00360 225 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 22 210 - -
Tsu02g00360 225 MobiDBLite consensus disorder prediction 1 27 - -
Tsu02g00360 225 PANTHER OS05G0238400 PROTEIN 22 210 - -
Tsu02g00360 225 SUPERFAMILY LEA14-like 41 141 - -
Tsu02g00360 225 Pfam Late embryogenesis abundant protein 89 197 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00360 Tsu-Chr2 3030040 3031655 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00360 - - cam:101495352 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00360 02 3030040 3031655 Tsu02g00360 02 3030040 3031655 ECH
Tsu05g00201 05 1462593 1463355 Tsu02g00360 02 3030040 3031655 PCT