Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03751 ATGGAGTCTCACACCGATGACAATTCAACCAAAATCACCTCTCAACAACGATGCGTCGGTTTACTATACGACGAGAGAATGTGTCAACACTTCAATCCAGACGACGATCGCCATCCCGAAACTCCAAATCGCATTAGGGCTATTTGGGACAAACTTCAAACCACGGGCATTACCGATCGaTGCATTAATTTGGATGCTGTTGATGCCGAAGATAAACATATACTAGCTGTGCATTCGAAAAAACATGTGGATCAGATTAAGACTATTAGCTATAAAAGTGTTAACTCGATGCGTAAGCTTGCAGCGAGACTTGATTCTATATACTTCAATGAAGGCTCAACTAAATCTGCATATCTTGCTGCTGGTTCTGCAATAGAGGTTGCTAAGAGAGTGGCTAGCAAAGAATTAAATTCTGCTGCTGCTATTATTAGGCCTCCCGGTCATCATGCAGAGCCGGATGAAGCTATGGGGTTTTGTCTTTTCAACAACGTTGCAATTGCTGCATCTTATCTCTTAAATGAAAATCCAGAATTTGgtgtaaagaaaattttaattgttgattGGGATGTCCATCATGGAAATGGTACTCAAAAAATGTTCTGGAATGATTCTCGAGTATTGTTCTTCTCCGTTCACAGGCATGAATATGGGAGTTTTTATCCAGCTGATGATAATGGATCTTATAACATGATTGGAGAAGGAGCTGGTGCTGGATACAATATAAATGTGCCATGGGAGAATGGGAGATGTGGTGATGCAGACTATTTTGCAGTGTGGGACCACATCTTACTACCCGTCGCCAAAGAATTTAATCCAGACATAATTATAGTTTCTGCTGGATTTGATGCAGCTGTTGGAGACCCTTTAGGTGGATGCCGTGTCACACCATTTGGTTTTTCCCTTATGTTGAAGAAGttgATGGATTTAGCTGAAGGTAGGATTGTATTAGTTTTAGAAGGAGGGTATAATCTGGATTCCATTGCAAAATCAATGCATGCTTGTTTGGAAGTTTTACTTGAAGACAAGCCTCTTGTGGGATCTTCAGAGGCCTATCCATTTGAGTCTACATGGCGTGTGATCCAAGCGGTTCGCGAGGAGTTGAGTCCCTTTTGGCCTACACTTGCGTCTGATTTGCCACAAAAATTAATCAGTCAAGTGTCACAACCTCCGCATACTCTTGTCTCAAGTTCcgactctgaggatgatgaagCTCCATCCAAATTAAAAACTATTGCAGAGCTCCTTGAGGAGGTCATGAAACCACTTTCCAACCTCAAAGTTTATGCAGATGAAGAGTATGCTGCTTCTTGTTCGTGGCGATCTGAATTGTCAAATGTTTACATATGGTATGCTTCATATGGTTCAAACATGTGGAGACCAAGATTTGATTGCTACATAGCTGGTGGGCAGGTGGAAGGTTTGCAGAAACCATGTTCTGGTTCGGTGAACAAAACTCTTCCAAATGAGATCCTTTGGAAAACTTTCCCTTGTCATATCTTTTTTGGTCGCGATTCCTCACATTCATGGGGTCCTGGAGGTGTTGCATTTCTTAATCCCGAGAGTAACTCTCAGCACAAGACCTACATGTGCATGTACAAAATTTCGCTAGAGCAGttcaatgatattttatttcagGAAAATGGTTTAAGCCTCGATGTGGGCTCTTCTTTATTTGATATGACTACTCTGAATGCCATCTCTAACAAGGAGTTCAGTTCTCAGGAGGTTGTCAAGGATGGTTGGTATGGTAATGTTGTCTACTTAGGAAAGGAGCATGACATTCCTATAATTACGATGACGTGTTCGCCTCTTGATATTGAGGGCTTCAAATCTGGGAAGCTACCATTGCGTGCGCCTAATAAATTGTACGCCAATACCTTGATAAAAGGGTTGGTAGAGGGAGAACAGTTCTCAGAGGCTGAAGCCATTGCTTACATAGATGCTGCTACTAAATCACTATGA 1962 0.4062 MESHTDDNSTKITSQQRCVGLLYDERMCQHFNPDDDRHPETPNRIRAIWDKLQTTGITDRCINLDAVDAEDKHILAVHSKKHVDQIKTISYKSVNSMRKLAARLDSIYFNEGSTKSAYLAAGSAIEVAKRVASKELNSAAAIIRPPGHHAEPDEAMGFCLFNNVAIAASYLLNENPEFGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHEYGSFYPADDNGSYNMIGEGAGAGYNINVPWENGRCGDADYFAVWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLGGCRVTPFGFSLMLKKLMDLAEGRIVLVLEGGYNLDSIAKSMHACLEVLLEDKPLVGSSEAYPFESTWRVIQAVREELSPFWPTLASDLPQKLISQVSQPPHTLVSSSDSEDDEAPSKLKTIAELLEEVMKPLSNLKVYADEEYAASCSWRSELSNVYIWYASYGSNMWRPRFDCYIAGGQVEGLQKPCSGSVNKTLPNEILWKTFPCHIFFGRDSSHSWGPGGVAFLNPESNSQHKTYMCMYKISLEQFNDILFQENGLSLDVGSSLFDMTTLNAISNKEFSSQEVVKDGWYGNVVYLGKEHDIPIITMTCSPLDIEGFKSGKLPLRAPNKLYANTLIKGLVEGEQFSEAEAIAYIDAATKSL 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03751 653 SUPERFAMILY Arginase/deacetylase 19 371 IPR023696 -
Tsu04g03751 653 Gene3D - 435 652 - -
Tsu04g03751 653 PANTHER BNAA09G05590D PROTEIN 16 606 - -
Tsu04g03751 653 PRINTS Histone deacetylase superfamily signature 145 168 IPR000286 -
Tsu04g03751 653 PRINTS Histone deacetylase superfamily signature 272 282 IPR000286 -
Tsu04g03751 653 Gene3D Histone deacetylase domain 11 403 IPR037138 -
Tsu04g03751 653 Pfam Histone deacetylase domain 38 337 IPR023801 -
Tsu04g03751 653 PANTHER HISTONE DEACETYLASE 16 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03751 Tsu-Chr4 46471794 46482883 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03751 K11406 - gmx:100788831 1070.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03751 04 46471794 46482883 Tsu04g03751 04 46471794 46482883 ECH
Tsu04g03751 04 46471794 46482883 Tsu03g01613 03 15971918 15973863 PCT