Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01613 ATGGCAGAAGAAACCGCACCCGAAGTTGTTGATCCCAACACCACCGTCACCACCGTCGATATGGAAGTTGAAAACGCCGTTGAGACCAAAGAAAAGCGATCGAGGGAAGAAGCAGAAGAGGCATCCAAAGACGAAGATGTCGTTTCgaagaaacctaaagttgatGTGGAAAAGTCAGTAGAAGAACAGAGGTTGGAGAAATTGGAGAAAAacgaagatgaagaagaaaaggaagcaTCTGTTGCTGTTAATTTGGGACCTAAAAGCTTTGATTCTTCATTGGAAATGTTTCATTATTTCCACAAATTTCTTCATGCTTGGCCTCAAAATCTCAATGTTAACAAGTATGAGCACACAATGTTGCTGGAATTGCTCAGGAATGGGCATCAAGAACCTGATAAAAAGATTGGCGTAGGGATTTGTGCTTTCCAAGTTCGTGACCATCCTCGCTATAATAGTAGGTGCTATTTCCTCATAAGGGAGGATGACTCTGTTGATGATTTCAGCTTCCGAAAGTGTGTGGATCATATTAGTCCTTTGCCAGAAGGGATGCAATTGAAATCTGAGGTGAACAAGAGGTTTGGTGGTGGTGGAAAGCATCATGGTGGCAGAGGAGGTGGTCGTGGAAGAGGAGGTGGTCGTGGAAGAGGAGGAAGGGGGAGATATTGA 669 0.4155 MAEETAPEVVDPNTTVTTVDMEVENAVETKEKRSREEAEEASKDEDVVSKKPKVDVEKSVEEQRLEKLEKNEDEEEKEASVAVNLGPKSFDSSLEMFHYFHKFLHAWPQNLNVNKYEHTMLLELLRNGHQEPDKKIGVGICAFQVRDHPRYNSRCYFLIREDDSVDDFSFRKCVDHISPLPEGMQLKSEVNKRFGGGGKHHGGRGGGRGRGGGRGRGGRGRY 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01613 222 PANTHER - 12 209 IPR044673 -
Tsu03g01613 222 PANTHER PROTEIN EMBRYO DEFECTIVE 514 12 209 - -
Tsu03g01613 222 Gene3D - 77 178 - -
Tsu03g01613 222 MobiDBLite consensus disorder prediction 192 222 - -
Tsu03g01613 222 Pfam Protein of unknown function (DUF3223) 102 174 - -
Tsu03g01613 222 Coils Coil 57 85 - -
Tsu03g01613 222 MobiDBLite consensus disorder prediction 1 80 - -
Tsu03g01613 222 MobiDBLite consensus disorder prediction 24 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01613 Tsu-Chr3 15971918 15973863 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01613 - - cam:101515238 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01613 03 15971918 15973863 Tsu03g01613 03 15971918 15973863 ECH
Tsu04g03751 04 46471794 46482883 Tsu03g01613 03 15971918 15973863 PCT