Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03688 ATGGTTGGAGACAAAGCAAAAAAGTTGAAACTCACCGAAAATCCCGAAGAAGTCGATGCTGAACTCATCCTCTCCATCGAGAAATTGCAAGAGATCCAAGACGACCTCGAAAAGATCAATGATGAAGCAAGTGATAAGGTTTTGGAAATTGAGCAGAAATATAATGAGATAAGGAAGCCGGTTTATGATAAGCGAAATGAGATTATCAAATCTATTCCTGATTTCTGGTTGAATgctTTTTTGAGTCATCCTGCTCTTAGTGAACTTTTGAACGAGGAAGATCAAAAGATATTCAAGTATTTGAGTTCTCTTGAGGTTGAAGACAATAAAGATGTCAAATCTGGATACACAATCACTCTTAATTTCAATCCCAATCCCTTTTTTGAGAATTCAAAACTTTCAAAGACTTTTACTTTCCTTGAAGAAGGAACAACAAAGATCACTGCTACCCCCATAACATGGAAAGAGGGCAAGGGAATACCCAATGGCGTCAATCATGATCATGAGAAGAACGGGAACAAACGGGCTCCTTGTGATGACAGTTGTGGTAATGAATGCAGTTTCCTTAGTTGGTTTTCTGATTCTGACTGTGAGCAGAAAGATGATATGGTTGACCTTCATGATGAGGTTGCAGAATTAATCAAGGATGATTTATGGTCAAATCCGCTTGTTTATTTTAACAATGAGGAGCCTGATGAAGAGGATGCTGATGATGAAGCTGATGATGAGGAAAAAGATGAGGAAGACTCTGAAGATGAGGATGATGACGAGGGTGGCGATGAGGAAGGCAATTGA 795 0.3887 MVGDKAKKLKLTENPEEVDAELILSIEKLQEIQDDLEKINDEASDKVLEIEQKYNEIRKPVYDKRNEIIKSIPDFWLNAFLSHPALSELLNEEDQKIFKYLSSLEVEDNKDVKSGYTITLNFNPNPFFENSKLSKTFTFLEEGTTKITATPITWKEGKGIPNGVNHDHEKNGNKRAPCDDSCGNECSFLSWFSDSDCEQKDDMVDLHDEVAELIKDDLWSNPLVYFNNEEPDEEDADDEADDEEKDEEDSEDEDDDEGGDEEGN 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03688 264 Gene3D Nucleosome assembly protein 73 230 - -
Tsu04g03688 264 SUPERFAMILY NAP-like 13 227 IPR037231 -
Tsu04g03688 264 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 257 - -
Tsu04g03688 264 MobiDBLite consensus disorder prediction 228 264 - -
Tsu04g03688 264 Pfam Nucleosome assembly protein (NAP) 70 228 IPR002164 GO:0005634|GO:0006334
Tsu04g03688 264 Gene3D - 2 72 - -
Tsu04g03688 264 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 257 IPR002164 GO:0005634|GO:0006334
Tsu04g03688 264 Coils Coil 22 53 - -
Tsu04g03688 264 Coils Coil 233 253 - -
Tsu04g03688 264 MobiDBLite consensus disorder prediction 220 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03688 Tsu-Chr4 45944239 45949158 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03688 K11290 - gmx:100810307 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03688 04 45944239 45949158 Tsu03g01606 03 15826801 15830551 ECH
Tsu04g03688 04 45944239 45949158 Tsu04g03688 04 45944239 45949158 ECH
Tsu03g01606 03 15826801 15830551 Tsu04g03688 04 45944239 45949158 PCT