Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01606 ATGGTGGCCGACAAGAGCAAGAAGTTGAAACTTTCCGACAACTCTGAGGATATCGATGGAGAACTTGTCCTCTCTATTGAAAAGTTGCAGGAAATTCAAGACGAGCTCGAAAAGATCAATGAGGAGGCGAGTGATAAAGTTCTTGAAATCGAGCAGAAGTATAATGAGATAAGGAAACCTGTGTATGATAAGCGCAATGATCTTATCAAGTCTATCCCTGATTTCTGGCTAACTGCGTTTCTGAGCCATCCTGCTCTTGGTGAACTTTTGAGTGAAGAAGATCAGAAGatatttAAGCATTTAAACTCTCTTGAGGTTGAAGACCATAAAGATGTCAAATCAGGCTATTCAATCACCTTCAACTTCAATCCCAATCCTTATTTTGAGGAAACAAAGATTGTGAAGACTTTTACCTTCAATGAAGAAGGAACAACAAAGATTACTGCTACACCCATAACGTGGAAAGAGGGCAAGGAAGTTCCCAATGGAGGTAGTCAGGAGAAGAAAGGGAACAAGCGGCCTGCTTCTGATATCAGTTTCTTTAGCTGGTTTAGCGACACTGAGCAGAAAGATGATCTGGATGACATTCATGATGAGACAGCAGAAATGATCAAGGATGATTTATGGCCAAATCCACTTAATTATTTCAACAATGAGGATATTGACGAGGCAGATGAGGATGACGATGAAGCTGGTGATGTGGGAAAGGATGATGATGACGactctgatgatgatgatgaccaAGAGGATGACGATGAGGACGAAGAATAG 771 0.3995 MVADKSKKLKLSDNSEDIDGELVLSIEKLQEIQDELEKINEEASDKVLEIEQKYNEIRKPVYDKRNDLIKSIPDFWLTAFLSHPALGELLSEEDQKIFKHLNSLEVEDHKDVKSGYSITFNFNPNPYFEETKIVKTFTFNEEGTTKITATPITWKEGKEVPNGGSQEKKGNKRPASDISFFSWFSDTEQKDDLDDIHDETAEMIKDDLWPNPLNYFNNEDIDEADEDDDEAGDVGKDDDDDSDDDDDQEDDDEDEE 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01606 256 MobiDBLite consensus disorder prediction 203 256 - -
Tsu03g01606 256 MobiDBLite consensus disorder prediction 219 256 - -
Tsu03g01606 256 Gene3D - 1 72 - -
Tsu03g01606 256 Gene3D Nucleosome assembly protein 73 220 - -
Tsu03g01606 256 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 249 IPR002164 GO:0005634|GO:0006334
Tsu03g01606 256 Coils Coil 22 56 - -
Tsu03g01606 256 MobiDBLite consensus disorder prediction 150 174 - -
Tsu03g01606 256 Pfam Nucleosome assembly protein (NAP) 70 218 IPR002164 GO:0005634|GO:0006334
Tsu03g01606 256 SUPERFAMILY NAP-like 12 217 IPR037231 -
Tsu03g01606 256 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01606 Tsu-Chr3 15826801 15830551 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01606 K11290 - gmx:100808081 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03688 04 45944239 45949158 Tsu03g01606 03 15826801 15830551 ECH
Tsu03g01606 03 15826801 15830551 Tsu03g01606 03 15826801 15830551 ECH
Tsu03g01606 03 15826801 15830551 Tsu04g03688 04 45944239 45949158 PCT