Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03601 atgGGAAATTGCCAAGCTATTGATACTGCAACTCTTGTAATACAACAACCAAatggaaaagaagaaagattATATTGGCCAATAAGTGCTAGTGAAGTTATGAAATCAAATCCTGATCACTATGTTGCTCTTCTTATCTCAACAACATTATGCacatcaaaagacaaagaaaattGTTCCAATAAGACCAgtgacaacaacaacaaagttcGTATTACACGTATTAAGCTTCTTAAACCAACAGATACACTTTTGCTTGGTCAAGTTTATAGACTTATCTCAACTCAAGAGGTTACAAAGGGTATGTGGGCTAAGAAACAAGCAAAGATGAAGAGAAACTCTGTGTCAGAATCAGCACAAAAGTCAAATCAGATTAAGGAAAGGATTAGTGACAAAGCAGCTAAGAGTTCTCAGCCTCAAGACAATAAGGAAACAAAATCTGAAAGACATGAGTCAAGGACAAAAGCAACAAGTAATGGTGGCAATCATAATAAGTCAAGAACATCAACATGGCAACCCTCTTTACAAAGCATCACTGAATCTTCCAGCTGA 552 0.3261 MGNCQAIDTATLVIQQPNGKEERLYWPISASEVMKSNPDHYVALLISTTLCTSKDKENCSNKTSDNNNKVRITRIKLLKPTDTLLLGQVYRLISTQEVTKGMWAKKQAKMKRNSVSESAQKSNQIKERISDKAAKSSQPQDNKETKSERHESRTKATSNGGNHNKSRTSTWQPSLQSITESSS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03601 183 PANTHER EXPRESSED PROTEIN 1 183 - -
Tsu04g03601 183 MobiDBLite consensus disorder prediction 104 183 - -
Tsu04g03601 183 Pfam PADRE domain 1 180 IPR025322 -
Tsu04g03601 183 MobiDBLite consensus disorder prediction 124 156 - -
Tsu04g03601 183 MobiDBLite consensus disorder prediction 157 183 - -
Tsu04g03601 183 PANTHER DUF4228 DOMAIN PROTEIN 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03601 Tsu-Chr4 45089822 45092134 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03601 - - gmx:100500500 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03601 04 45089822 45092134 Tsu04g03601 04 45089822 45092134 ECH
Tsu04g03601 04 45089822 45092134 Tsu03g02220 03 24135724 24137408 PCT