Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02220 ATGGGAAATTGCCAAGCAATTGATGCTGCAACACTAGTCATACAACATCCAAATGGGAAAATAGAGAACTTTTATTCATCTATAAATGCAAACCAAGTTATGAAAATGAACCCTGGTCATTGTGTTGCTCTTCTTATCTCCACCACAATCTATCCAAACAAGAACATTGAAAATTGTCCCAAAAATATTAATAGTGACACTAAAACCAACCCGGTTCGATTAACTCGCATAAAGCTTCTTAAACCGACCGATGATCTTCTTCTTGGACATGTTTATAGACTCATCACAACTCAAGAGGTTATGAAGGGTCTAAGGGAAAAGAAACAAGCAAAGATGAAACAGAACATGTTAGAATCAGTTCATAAGCAGGATTTGGTGAAGGAAAATTTGGGGTTAGAGTTGGAGAAAAAATCTAGGAGGTTTGATACACAGGATAATCAGGCAACCAAACCCGAAAGATCGCGATCAAGGACAGCTTCATCAACTAATAATGCTGCAAGTGTCACAGCTAAGACAAGATTCTGGCAACCATCTTTGCAAAGTATCTCAGAGGTAGCCAGCTGA 564 0.3848 MGNCQAIDAATLVIQHPNGKIENFYSSINANQVMKMNPGHCVALLISTTIYPNKNIENCPKNINSDTKTNPVRLTRIKLLKPTDDLLLGHVYRLITTQEVMKGLREKKQAKMKQNMLESVHKQDLVKENLGLELEKKSRRFDTQDNQATKPERSRSRTASSTNNAASVTAKTRFWQPSLQSISEVAS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02220 187 MobiDBLite consensus disorder prediction 153 170 - -
Tsu03g02220 187 Pfam PADRE domain 1 184 IPR025322 -
Tsu03g02220 187 MobiDBLite consensus disorder prediction 136 152 - -
Tsu03g02220 187 PANTHER EXPRESSED PROTEIN 1 187 - -
Tsu03g02220 187 MobiDBLite consensus disorder prediction 136 170 - -
Tsu03g02220 187 PANTHER DUF4228 DOMAIN PROTEIN 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02220 Tsu-Chr3 24135724 24137408 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02220 - - gmx:100813476 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02220 03 24135724 24137408 Tsu03g02220 03 24135724 24137408 ECH
Tsu04g03601 04 45089822 45092134 Tsu03g02220 03 24135724 24137408 PCT