Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03358 ATGGCACCTTATTATTGTGTAAATGAGAACAAAGAGTGTGTAAAATGGGTTGAAACATACTTCAAAGACTGTCTTTGCAATTTGAGAGATGACATATCATTCAGTTTAGGACTCATGAGTTTGGTGTCATGGGGAGTTGCTGAAATTCCTCAGATAATCACTATTTTTCGTACCAAGTCTAGTCATGGAGTTTCTCTTGCCTTTCTCCTCACTTGGGTTGCTGGAGACATATGCAACTTGGTGGGTTGCCTCCTGGAACCAGCTACGTTGCCTACACAGTTTTACACAGCCCTGCTTTATGCAAGCACTACAGTCATATTACTGCTGCAAATCGCATACTATGACCACATTCTCAGATGGTGCAAACGTCGCCACAATATTAACAACAATTGGGCTaatgaagaagagaaaagaCCCTTGAAACCAAAACCAAGTCAAGAATACACTGAGATTGTAATACCAAATGGCACACACAAATCAGCAGCTCCAAGGGAGTATTACTATATGTCAGCAAGATCGTTGGCCGGGAGCGCAACTCCACCATCACTTACCTACATAAGAGCTGCTAAAAGTGGTCCTTCAGCCATGGAATTCATTCACGACTCttctgatgatgaagaatcttCTCAAGTTACGTCTAACAGCTCTACAACTCAGCCTAGGCCCATACTACCACGTTCTTTAGATGGTCGTTTTGGAACATTTCTAGCTACGGCCATTAATTTACCCTATAAGGGTAATGCTATGACTATAAGATATGGATACATAGGATATACTGGAATAAAGCTCTTCCAGGAAAATGAGGTACATAGTAAATATGGACAATATTTGGGATGGGTCATGGCTGCTATCTATACATGTAGTCGTATTCCTCAAATTTGGTTGAATGTAAGTCTTAAAaccttaattaattttgGCTTAAATCCTTTCATGTTCGTCTTTGCACTGATTGCTAATGTCTCATATGTGGGAAGTATTCTTGTACGAACAACAGAGTATGAAAGCATCAAAGCTAATATGCCATGGCTATTGGATGCCACAGTTTGTGTGGCACTAGACATTTTTATAATATCACAGTACATTTACTATAGATACTTTCGCAGCAGAGAAGCAAAAAGTGATGATGGAGAAAACTTGAAGTAG 1143 0.3841 MAPYYCVNENKECVKWVETYFKDCLCNLRDDISFSLGLMSLVSWGVAEIPQIITIFRTKSSHGVSLAFLLTWVAGDICNLVGCLLEPATLPTQFYTALLYASTTVILLLQIAYYDHILRWCKRRHNINNNWANEEEKRPLKPKPSQEYTEIVIPNGTHKSAAPREYYYMSARSLAGSATPPSLTYIRAAKSGPSAMEFIHDSSDDEESSQVTSNSSTTQPRPILPRSLDGRFGTFLATAINLPYKGNAMTIRYGYIGYTGIKLFQENEVHSKYGQYLGWVMAAIYTCSRIPQIWLNVSLKTLINFGLNPFMFVFALIANVSYVGSILVRTTEYESIKANMPWLLDATVCVALDIFIISQYIYYRYFRSREAKSDDGENLK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03358 380 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 1 377 - -
Tsu04g03358 380 PANTHER PQ-LOOP PROTEIN/TRANSMEMBRANE FAMILY PROTEIN 1 377 - -
Tsu04g03358 380 MobiDBLite consensus disorder prediction 208 223 - -
Tsu04g03358 380 Pfam PQ loop repeat 274 329 IPR006603 -
Tsu04g03358 380 Pfam PQ loop repeat 32 88 IPR006603 -
Tsu04g03358 380 Gene3D - 35 119 - -
Tsu04g03358 380 Gene3D - 273 376 - -
Tsu04g03358 380 MobiDBLite consensus disorder prediction 197 226 - -
Tsu04g03358 380 SMART ctns 287 320 IPR006603 -
Tsu04g03358 380 SMART ctns 46 77 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03358 Tsu-Chr4 42736359 42741615 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03358 K23678 - gmx:100789634 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03358 04 42736359 42741615 Tsu04g03358 04 42736359 42741615 ECH
Tsu05g00701 05 5905871 5910891 Tsu04g03358 04 42736359 42741615 PCT