Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02941 ATGGCATTAAGCAACAATGTAATAGGAGTCATAAATTTCATAGCTGTTCTCTTCTCAATCCCAATCATAGCTACTGGAATTTGGCTAACAACTTTACAAGCAGAATCATGTGTCAAAATCCTACAATGGCCAATAATCATTTTAGGGATACTAATTTTAATTGTTGGTATGGTAGGCTTCATTGGAGCCTTTTGGAGAATCCCAATGCTTCTTATATTCTACCTCATTGCAATGTTTGTGCTCATTGTATTGTTGGGTTCtttggtgatttttttatattcaatcaCACTTAGAGGACATGGGAATATTGAACCTAATAGGTCATATTTAGAATATCATGTGGATGATTTTTCAATTTGGCTTCGTAGAAGGGTAAGAAGTGAACACAAATGGGATGGAATTAGGAGTTGTCTTAGTTCATCAAATATGTGTGCTGAATTGAATCAAAGTTATAGATTGGCTCAAGACTTCTTTAAAGCACATCTATCACCCTTGCAGTCAGGGTGTTGCAAACCACCAACAAAATGTGGTTACACATTTGTGAACCCAACCTATTGGATTAGCCCAATCAACAATAGTGAAGATATGGATTGCATGAAATGGAGCAATGAACAAACACAACTTTGTTACAATTGTGATTCATGCAAAGCTGGTTTATTAGCAACACTTAGGATAGAGTGGAGAAAAGCCAATGTGATATTGATTGTTACATTGGTTGCTTTAATTGTTGTGTATTTGTTTGGGTGCTTTGCCTTTAGGAATGCCAAAACTGAGGAGCTCTTTCGCAAATACAAGCAAGGCTACACTTGA 810 0.3556 MALSNNVIGVINFIAVLFSIPIIATGIWLTTLQAESCVKILQWPIIILGILILIVGMVGFIGAFWRIPMLLIFYLIAMFVLIVLLGSLVIFLYSITLRGHGNIEPNRSYLEYHVDDFSIWLRRRVRSEHKWDGIRSCLSSSNMCAELNQSYRLAQDFFKAHLSPLQSGCCKPPTKCGYTFVNPTYWISPINNSEDMDCMKWSNEQTQLCYNCDSCKAGLLATLRIEWRKANVILIVTLVALIVVYLFGCFAFRNAKTEELFRKYKQGYT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02941 269 Pfam Tetraspanin family 6 250 IPR018499 GO:0016021
Tsu04g02941 269 PANTHER TETRASPANIN-8-RELATED 1 268 IPR044991 GO:0009734|GO:0016021
Tsu04g02941 269 PANTHER TETRASPANIN/PERIPHERIN-RELATED 1 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02941 Tsu-Chr4 35795606 35797563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02941 1 269 Miscellaneous Gene Families AT5G46700 66.914 9.15e-128 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02941 - - gmx:100789266 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02941 04 35795606 35797563 Tsu04g02941 04 35795606 35797563 ECH
Tsu05g01260 05 11362956 11365131 Tsu04g02941 04 35795606 35797563 PCT