Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02662 ATGGCAGGAGGAGGAGGTGGTGGAGGAGCTCCGGCACCGAAAGCAGATGAACCACAGCCACATCCACCGAAGGATCAGTTACCAAATGTTTCTTATTGCATAACAAGTCCTCCACCTTGGCCTGAGGCCATACTTCTTGGTTTTCAACATTATCTTGTGATGCTGGGAACAACCGTGTTAATTCCTACTTCTCTCGTTCCCCAGATGGGAGGTGGCAATGAGGAGAAAGCTAAAGTTATCCAAACACTACTCTTTGTGGCTGGAATCAACACTTTAGTGCAAACACTGTTTGGAAGCCGATTGCCTGCAGTAATTGGAGGGTCTTATACCTTTGTTCCGACAACAATCTCAATAATTCTTGCTGGTCGATTCAATGATGAGCCAGATCCTATAGAGAAATTCAAGAAGATTATGCGGGCAACTCAAGGTGCTCTTATTGTTGCTTCCACCCTTCAAATAGTACTAGGGTTTAGTGGTCTTTGGCGTAATGTTGCAAGgTTCTTGAGTCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTGTATGAATTGGGCTTTCCTGGGGTTGCTCAATGTGTAGAGATTGGATTGCCAGAGCTTGTATTACTAGTATTTGTTTCACAGTTTGTACCCCATGTGCTTCATTCAGGAAAACATGTCTTCGACCGTTTTTCTGTTTTATTCACGGTTGCAATTGTCTGGTTATATGCTTATATTCTCACCGTTGGAGGGGCCTATAACCATGTTAAACATAAAACACAGATAACCTGCCGCACTGATCGTTCTGGCCTAGTAGATGCTGCTCCATGGATTCGTGTTCCGTATCCATTTCAATGGGGTGCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCATCCTTTGTTGCTCTAGTAGAGTCCAGTGGAGCTTTTATTGCTGTTTATCGGTTTGCAAGTGCAACACCATTACCACCATCAATTCTTAGTCGGGGTATTGGTTGGCAGGGTGTTGGCATTTTGTTATCAGGATTGTTTGGAACTGGCATTGGATCTTCTGTATCTGTAGAGAATGCTGGTCTTTTGGCTTTGACACGTGTTGGAAGTCGAAGAGTGGTGCAAATATCTGCCGggtttatgattttcttttcaattttagGGAAATTTGGAGCAGTATTCGCTTCAATTCCTCCTCCTATTGTTGCTGCACTATACTGCTTGTTCTTTGCTTATGTTGGTGCGGGAGGTCTAAGTTTTCTTCAGTTCTGCAACCTCAATAGTTTTAGGACAAAGTTTGTATTAGGCTTTTCCATCTTCCTAGGCTTATCTATTCCACAGTACTTCAATGAGTACACAGCAATTAATGGTTTCGGTCCTGTTCACACCGGAGCAAGATGGTTCAATGATATAGTAAATGTGCCGTTCCAATCGAAAGCATTTGTTGCTGGAGTTATAGCATATTTCTTGGATAACACACTACATAAGAAAGAATCTGCTATTCGAAAAGATAGAGGAAAGCATTGGTGGGACAAGTACAGGTCCTTCAAGACCGACACAAGGAGTGAGGAGTTTTATTCACTGCCTTTCAATCTAAACAAATACTTCCCATctgtgtaa 1611 0.4221 MAGGGGGGGAPAPKADEPQPHPPKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGINTLVQTLFGSRLPAVIGGSYTFVPTTISIILAGRFNDEPDPIEKFKKIMRATQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAQCVEIGLPELVLLVFVSQFVPHVLHSGKHVFDRFSVLFTVAIVWLYAYILTVGGAYNHVKHKTQITCRTDRSGLVDAAPWIRVPYPFQWGAPSFDAGEAFAMMMASFVALVESSGAFIAVYRFASATPLPPSILSRGIGWQGVGILLSGLFGTGIGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFVLGFSIFLGLSIPQYFNEYTAINGFGPVHTGARWFNDIVNVPFQSKAFVAGVIAYFLDNTLHKKESAIRKDRGKHWWDKYRSFKTDTRSEEFYSLPFNLNKYFPSV 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02662 536 MobiDBLite consensus disorder prediction 1 30 - -
Tsu04g02662 536 Pfam Permease family 42 446 IPR006043 GO:0016020|GO:0022857|GO:0055085
Tsu04g02662 536 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 7 536 - -
Tsu04g02662 536 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 7 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02662 Tsu-Chr4 30069342 30075587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02662 12 536 Organic Solute Cotransporters AT5G49990 80.608 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02662 - - gmx:100804903 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02662 04 30069342 30075587 Tsu04g02662 04 30069342 30075587 ECH
Tsu04g02662 04 30069342 30075587 Tsu03g02222 03 24167909 24172545 PCT