Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02222 ATGGCAGGAGGTGGAGGAGCTCCATCTAAATCAGATGAACCACAACCACATCCTCCAAAGGATCAACTTCCAAATATTTCTTACTGCATTACTAGTCCTCCTCCATGGCCTGAGGCCATACTTCTTGGTTTTCAACATTTCCTTGTGATGCTCGGTACAACTGTGCTCATTCCAACTGCTCTTGTTCCTCAGATGGGAGGTGGAAATGAGGAGAAGGCTAGAGTTATTGAAACACTACTTTTTGTGGCAGGTATTAATACATTGGTGCAAACACTCTTTGGATCTCGACTACCTGCAGTAATCGGAGGGTCTTATACTTATGTGCCAACCACAATCTCAATTATTCTTGCTGGTCGATTCAGTGGTGAACCAGATCCTATAGAGAAATTCAAGAAGATAATGAGGGCAGTACAGGGTGCTCTTATTGTTGCCTCAACTCTTCAAATTGTACTCGGCTTTAGTGGCCTTTGGCGTAATGTTGCAAGGTTCTTAAGTCCACTTTCAGCGGTTCCATTGGTTTCTCTTGTTGGTTTTGGGTTGTACGAGTTAGGTTTTCCTGGGGTTGCTAAGTGTATAGAGATTGGACTGCCGGAGCTTATTTTGCTAGTATTTTTTTCCCAGTATGTGCCCCATTTGTTACATTCGGGGAAAAATATCTCTGACCGGTTTGCTGTTTTATTTACAATTGTAATTGTGTGGATATATGCTCATCTACTCACTGTTGGAGGGGCCTATAATGGTGCTGCACCAAAAACACAGGCATCCTGCCGCACTGATCGTGCTGGACTTATCGATGCTGCTCCTTGGATCAGAGTTCCATATCCCTTTCAATGGGGAGCACCTACATTTGATGCAGGCGAAGCATTTGCTATGATGATGGCATCTTTCGTTGCTCTTGTAGAGTCCAGTGGAGCTTTCATTGCTGTATATAGATTTGCAAGTGCAACACCATTACCGCCTTCTATTCTTAGTCGGGGTATTGGTTGGCAGGGAGTCGGCATTCTGTTATCGGGATTGTTTGGAACAATTAGTGGATCCTCCGTATCTGTAGAAAATGCAGGTCTTTTGGCTTTGACACGTGTTGGCAGTAGAAGAGTTGTGCAGATTTCCGCAGGAttcatgattttcttttcaattctcGCAATTAATGGCTTTGGTCCAGTCCACACAGGCGGAAGATGGTTCAATGATATAATTAATGTGCCATTTCAATCAAAAGCATTTGTTGCGGGTGTTGTGGCATATTTCCTAGACAACACATTACATAAGAAGGATTCATCAATTAGAAAGGACAGAGGCAAACATTGGTGGGACAAGTATAAATCCTTCAAGGGTGACACAAGAAGTGAGGAGTTCTATTCACTGCCTTTCAATCTAAACAAATATTTTCCATCTGTTTAA 1401 0.4233 MAGGGGAPSKSDEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHFLVMLGTTVLIPTALVPQMGGGNEEKARVIETLLFVAGINTLVQTLFGSRLPAVIGGSYTYVPTTISIILAGRFSGEPDPIEKFKKIMRAVQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAKCIEIGLPELILLVFFSQYVPHLLHSGKNISDRFAVLFTIVIVWIYAHLLTVGGAYNGAAPKTQASCRTDRAGLIDAAPWIRVPYPFQWGAPTFDAGEAFAMMMASFVALVESSGAFIAVYRFASATPLPPSILSRGIGWQGVGILLSGLFGTISGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILAINGFGPVHTGGRWFNDIINVPFQSKAFVAGVVAYFLDNTLHKKDSSIRKDRGKHWWDKYKSFKGDTRSEEFYSLPFNLNKYFPSV 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02222 466 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 1 380 - -
Tsu03g02222 466 Pfam Permease family 38 379 IPR006043 GO:0016020|GO:0022857|GO:0055085
Tsu03g02222 466 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 381 466 - -
Tsu03g02222 466 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 381 466 - -
Tsu03g02222 466 MobiDBLite consensus disorder prediction 1 26 - -
Tsu03g02222 466 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 1 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02222 Tsu-Chr3 24167909 24172545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02222 1 380 Organic Solute Cotransporters AT5G62890 84.474 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02222 - - gmx:100791553 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02222 03 24167909 24172545 Tsu03g02222 03 24167909 24172545 ECH
Tsu04g02662 04 30069342 30075587 Tsu03g02222 03 24167909 24172545 PCT