Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02610 ATGAAAGGTTATTATTCAGTTTCTTACACAAAAAAACATATGAAAGACTCTTTTTTTTCATCTCAATTCACAAcaagacaacaacaacaatgcaAACAACCAAATCATGTTGTCTCAGAACAAACAAGTTTACTAAATCATTCTCTTAaattgtcttcttcttcttccacttcCCAAAAAAATCTACTACCTATTCTACATGTTTTTGTTactttgtttctgttttttaccTCAATTAGTCCAATTTTGTCACACTCCATTGTCtcaaattcatcttcttcacaacTAAACTCACACAACAATTTTAACCAAACTTTTAGACCAAATGTTTCATTGCATAAGTTGAGAAGAATTAGAGCTCATTTGAAGAAGATCAACAAGCCTCCTATCAAGACAATTAAGAGTCCAGATGGAGATTTAATAGATTGTATTATATCTCATCAACAACCAGCTTTTGACCATCCAAAACTCAAAGGACAAAAACCATtgGATCCACCAGAAAGGCCAAAAGGATACAACGATAACAATCGAGAAAATGCGACAAATAATTTTCAACTATGGACTGATTCTGGTGAAGAATGTCCTAAAGGTACTATCCCGATCAGAAGAACAACGGAACAAGATTTTCTAAGAGCAAATTCTGTTAGAAGATTTGGAAGAAAACCAAGAGGTGTACGGAGAGACTCATCAGGCACTGGTCATGAGCATGCAGTTATGTTTGTAAATGGAGAACAATATTATGGAGCAAAAGCAAGTATAAATGTGTGGACACCAAGGGTAACTGATCAATATGAATTTAGCTTGTCACAAATTTGGGTTATTGCTGGATCATTTGGTAATGATCTTAATACAATAGAAGCTGGATGGCAGgtAAGTCCTGAGCTATATGGTGATAATTATCCAAGATTCTTCACTTATTGGACTaCGGATGCATATCAAGCAACTGGATGCTACAATTTACTATGTTCAGGatttatccaaacaaacaacAGAATAGCAATAGGGGCTGCAATCTCCCCAAGATCAATCTATAATGGAAGACAGTTTGATATTGGCTTAATGGTTTGGAAAGACCCAAAACATGGACATTGGTGGCTTGAATTTGGGTCAGGGCTACTAGTTGGATATTGGCCAGCAAACTTGTTTAGTCATTTAAGAAGTCATGCAAGTATGGTACAATTTGGAGGAGAAATTGTGAATTCACGTTCAAGGGGCTACCACACTGGAACTCAAATGGGAAGTGGGCATTTTTCAGAAGAAGGTTTTAAAAAAGCAGCTTATTTTAGAAACTTACAAGTTGTTGATTGGGATAATAACTTGCTTCCTTTATCAAATATTCACCAATTAGCTGATCATTCAAATTGCTATGATATAAAAGAAGGAAGAAATAATGTTTGGggaacttatttttattatggaGGTCCTGGAAGAAATGTGAGATGTCCATGA 1449 0.323 MKGYYSVSYTKKHMKDSFFSSQFTTRQQQQCKQPNHVVSEQTSLLNHSLKLSSSSSTSQKNLLPILHVFVTLFLFFTSISPILSHSIVSNSSSSQLNSHNNFNQTFRPNVSLHKLRRIRAHLKKINKPPIKTIKSPDGDLIDCIISHQQPAFDHPKLKGQKPLDPPERPKGYNDNNRENATNNFQLWTDSGEECPKGTIPIRRTTEQDFLRANSVRRFGRKPRGVRRDSSGTGHEHAVMFVNGEQYYGAKASINVWTPRVTDQYEFSLSQIWVIAGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFIQTNNRIAIGAAISPRSIYNGRQFDIGLMVWKDPKHGHWWLEFGSGLLVGYWPANLFSHLRSHASMVQFGGEIVNSRSRGYHTGTQMGSGHFSEEGFKKAAYFRNLQVVDWDNNLLPLSNIHQLADHSNCYDIKEGRNNVWGTYFYYGGPGRNVRCP 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02610 482 MobiDBLite consensus disorder prediction 152 179 - -
Tsu04g02610 482 Pfam Neprosin 264 475 IPR004314 -
Tsu04g02610 482 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 45 482 - -
Tsu04g02610 482 MobiDBLite consensus disorder prediction 157 174 - -
Tsu04g02610 482 Pfam Neprosin activation peptide 132 239 IPR025521 -
Tsu04g02610 482 Gene3D - 254 369 - -
Tsu04g02610 482 PANTHER CARBOXYL-TERMINAL PEPTIDASE 45 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02610 Tsu-Chr4 29497812 29502226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02610 - - gmx:100820129 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02610 04 29497812 29502226 Tsu03g02272 03 25460499 25465209 ECH
Tsu04g02610 04 29497812 29502226 Tsu04g02610 04 29497812 29502226 ECH
Tsu04g02610 04 29497812 29502226 Tsu03g02272 03 25460499 25465209 PCT