Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02272 ATGGAAGCTAAGGAATACTCAATTTCTTGCAAAAGACATAGGAAAGAACCATATTTTGCAGCACACCACACAAAAAGACAACACCATATTGTCTCAAAACAAGCATGTACACACAACCATTCTCTCATATTGTCCACTTCCCGAAACATTCCACCTATACTAcctgtttttgtttctttgttacTTCTTCTTACTTCAACTACCTCAGCATTGTCTCATCACACCATTGTCTCAAATTCTAGCCACCCTTTAAAAACTAACCAAACTTTTAAAGCAGGTGCAGAGTTGCTTAAGTTAACAAGAATCAGAACTCACCTCAAGAAGATCAATAAGCCTGCCGTGAAGACAATTCAGAGTCCGGATGGTGATTTGATAGATTGTGTTTTAACTCACGAGCAACCAGCTTTTGATCATCCTAAGCTTAAAGGGCATACACCATTGGATCCACCAAAAAGGCCAAAAGGATACTACAAAAATGGAATAAATGTTAGTGAGAGGTTTCAGCTGTGGACTGATTCAGGTGAAGCATGTCCAGAAGGAACTATTCCAATTAGAAGAACAACAGAAGAGGATATTCTAAGAGCAAGTTCTATCCGAAGATTCGGAAGAAAACCAAAACCTGTACGGAGAGATTCAACTAGTAGTGGTCATGAGCATGCAATTGTTTTTGTAAATGGAAATCAATACTTTGGAGCAAAGGCAAACATAAATGTGTGGACACCACAAGTAACAGATGAATATGAATTTAGTTTGTCACAAATATGGGTTATTGCTGGCTCCTTTGGTAATGATCTGAATACCTTAGAAGCTGGTTGGCAGGTAAGTCCAGAACTGTATGGAGATAACTATCCAAGGTTCTTCACTTATTGGACAACAGATGCATATCAAACAACTGGATGCTACAACTTACTTTGTTCTGGCTTTATCCAAACTAACAACAAGATAGCAATAGGAGCAGCAATCTCTCCTACATCAGCTTATAACAGCAGACAGTTTGATATTGGCATAATGATTTGGAAGGATCCAAAGCATGGACACTGGTGGTTAGAGTACGGATCAGGACTAATAGTTGGATATTGGCCATCATTCATGTTTAGTCACTTGAAGAGTCATGCAAACATGGTACAATTTGGTGGAGAGATTGTGAATTCTCATTCAAAAGGTTACCACACTGGCACTCAAATGGGGAGTGGTCATTTTGCAGAAGAAGGATTTAGAAAATCAGCTTATTTTAGAAACTTACAAGTCATTGATTGGGATAATAACTTACTTCCTCTTGCTAATATTCATTACTTGGCTGATCATTCTAATTGTTATAATATTAAGCAGGGTAATAGCAATGCTTGGggaacttatttttattatggaGGTCCTGGAAGAAATGTTAAATGCCCATAA 1398 0.3698 MEAKEYSISCKRHRKEPYFAAHHTKRQHHIVSKQACTHNHSLILSTSRNIPPILPVFVSLLLLLTSTTSALSHHTIVSNSSHPLKTNQTFKAGAELLKLTRIRTHLKKINKPAVKTIQSPDGDLIDCVLTHEQPAFDHPKLKGHTPLDPPKRPKGYYKNGINVSERFQLWTDSGEACPEGTIPIRRTTEEDILRASSIRRFGRKPKPVRRDSTSSGHEHAIVFVNGNQYFGAKANINVWTPQVTDEYEFSLSQIWVIAGSFGNDLNTLEAGWQVSPELYGDNYPRFFTYWTTDAYQTTGCYNLLCSGFIQTNNKIAIGAAISPTSAYNSRQFDIGIMIWKDPKHGHWWLEYGSGLIVGYWPSFMFSHLKSHANMVQFGGEIVNSHSKGYHTGTQMGSGHFAEEGFRKSAYFRNLQVIDWDNNLLPLANIHYLADHSNCYNIKQGNSNAWGTYFYYGGPGRNVKCP 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02272 465 Pfam Neprosin activation peptide 116 222 IPR025521 -
Tsu03g02272 465 Pfam Neprosin 247 458 IPR004314 -
Tsu03g02272 465 Gene3D - 239 351 - -
Tsu03g02272 465 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 35 465 - -
Tsu03g02272 465 PANTHER CARBOXYL-TERMINAL PEPTIDASE 35 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02272 Tsu-Chr3 25460499 25465209 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02272 - - gmx:100782442 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02610 04 29497812 29502226 Tsu03g02272 03 25460499 25465209 ECH
Tsu03g02272 03 25460499 25465209 Tsu03g02272 03 25460499 25465209 ECH
Tsu04g02610 04 29497812 29502226 Tsu03g02272 03 25460499 25465209 PCT