Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02599 ATGATGGCAAATCTTCCAGCTATGCTTTCTTTGAGACATTTTTTGGTGTTATCGTTGGCTTTAAATGTTAGTTTAATTCTGAGAATGGTGTATGAGAGTGATCAACAAGGAGGTAACAATAATAAAATGGAAGGGTATAATCGGATTATTCAAAAATCACGTTTGGCTATAACTTCTTTTGCTAATTCTACTCGTAAAGATCATTCCGGAATCATGGATAAAGTAATCAACCTTGATCATGGTGATCCAACAATGTACGAACAATTTTGGCGACAAATGGGAGACAAAACCACAATAATAATACCAGGATGGCAATCTATGAGTTATTTTTCTGATCCAACAAGCATATGTTGGTTTCTTGAACCAGAATTTAAGAAACAAGTAGTGAGGTTACATAATGTGGTTGGAAATGCAGTGACACAAGATCGTCACGTTGTTGTTGGAACAGGTTCTTCTCAATTGATTCTTGCTGCTCTTTATGCTCTTTCTTCTCATGATGCTGCTAAACCTATCAGCGTTGTTTCTGCCGTACCTTATTACTCGTCTTATCCATCAATGACAGATTACCAGAAATCAGGACTTTACAAATGGGGTGGTGATGCAGAAAGTTTTGACAAAGATGAGCCTTACATTGAGCTGGTTACTACTCCAAATAACCCTGATGGATATATAAGGCAATCAATAGTGAACCGAAGCCAAGGACTATTGATTCATGACCTTGCCTATTATTGGCCACAATACACTCCAATATTATCTGCTACAGATTATGATCTTACTCTTTTCACTGTCTCAAAAAGCACTGGTCATGCTGGAATGCGCATAGGGTGGGCTCTTGTCAAAGATCGTGAGGTAGCaaagaaaatgacaaaattcATAGAGCTAAATACAATTGGTGTCTCCAAGGATTCTCAACTCAGAGCTGCCAAGGTTTTGAAAACCGTTTCTGACAGTTGCGAAGAAGAGAACTCCCAAGATGGTGAAGAATCCTTTTTCAAGTACAGTTATAGGATGATGGAGCAAAGGTGGAAGCTACTAACAGCAGCAGTTGATAGTGGTGATTTATTCAGTTTGCCCAAATTTTCTTCTGCATTTTGCACCTTTCTCAATCAAGAGTCGGAAACTCAACCAGCATTTGCTTGGTTGAAGTGTGAAGGGGATATAGAGGACTGTGAAAGTTTTCTTCGTGGACACAAGATTTTGACAAGAGGTGGTAAACAATTTGGGGCTAGCCCAAAATATGTAAGAATTAGCATGCTGGATACAGATGATAATTTTATGCATTTAATAGATAGGCTATCTACCATACAAACCAAACAACAGCAGTGA 1326 0.3801 MMANLPAMLSLRHFLVLSLALNVSLILRMVYESDQQGGNNNKMEGYNRIIQKSRLAITSFANSTRKDHSGIMDKVINLDHGDPTMYEQFWRQMGDKTTIIIPGWQSMSYFSDPTSICWFLEPEFKKQVVRLHNVVGNAVTQDRHVVVGTGSSQLILAALYALSSHDAAKPISVVSAVPYYSSYPSMTDYQKSGLYKWGGDAESFDKDEPYIELVTTPNNPDGYIRQSIVNRSQGLLIHDLAYYWPQYTPILSATDYDLTLFTVSKSTGHAGMRIGWALVKDREVAKKMTKFIELNTIGVSKDSQLRAAKVLKTVSDSCEEENSQDGEESFFKYSYRMMEQRWKLLTAAVDSGDLFSLPKFSSAFCTFLNQESETQPAFAWLKCEGDIEDCESFLRGHKILTRGGKQFGASPKYVRISMLDTDDNFMHLIDRLSTIQTKQQQ 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02599 441 Pfam Allinase 76 435 IPR006948 GO:0016846
Tsu04g02599 441 Gene3D - 121 324 IPR015421 GO:0003824
Tsu04g02599 441 CDD AAT_like 122 432 - -
Tsu04g02599 441 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 437 - -
Tsu04g02599 441 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 1 437 - -
Tsu04g02599 441 Gene3D - 48 116 IPR037029 GO:0016846
Tsu04g02599 441 Gene3D Aspartate Aminotransferase, domain 1 328 436 IPR015422 GO:0003824
Tsu04g02599 441 SUPERFAMILY PLP-dependent transferases 68 434 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02599 Tsu-Chr4 29332712 29341992 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02599 K16903 - gmx:100818522 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02599 04 29332712 29341992 Tsu04g02599 04 29332712 29341992 ECH
Tsu04g02599 04 29332712 29341992 Tsu03g02284 03 25658506 25666688 PCT