Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02284 ATGGCGAAGATTCCCAACACTGGAGTATTCTCTTCAAGACACTTGTTGATGTTATCACTAGCTTTGAATGTGAGCTTGATACTGAAAATGATGTATGAAGGTGAAGAAGttcataataataacaactcTTGTTTGAAAAATGAAAGAGGAACTTCAATTACTACTAGAGCTGATTTTGATACAAAAGGACATAGTAGTAATATTCACAAATCACGTTTGGTTATGTCAACAACTTCGTCTTTGGTGAATTCTACTTGCACAGATCTTACAAGAGGAAACAACAGAATAATCAATTTAGACCATGGGGATCCGACAGTGTATGAAAGATATTGGCGACAAACGGGTGACAAAACCACGATTATAATTCCTGGATGGCAATCCATGAGTTATTTTTCGGATGTATCCAACATATGCTGGTTTCTTGAACCAGAATTTGCAAAGGAGGTAGTGAGGTTACACAAAGTGGTCGGTAATGCAGTCACAGATGGTCGTCACATTGTTGTAGGGACAGGTTCCTCTCAACTTTTTCTAGCTGCACTCTATGCTCTCTCCCCATCTCATGCATCTCAACCAATCAGCGTTGTTTGTGCCTCACCCTACTACTCTTCATACCCATCAATGACAGATTACCTAAAATCTGGACTATACAAATGGGCCGGTGATGCAGATAGTTATGAGAAAGATGGTCCCTACATTGAGCTGGTAACTTCACCAAATAATCCTGATGGACATTTGAGGAAGTCTAAGGTGAATAGAAGTCAGGGACTTCTTGTTCATGATCTTGCATATTACTGGCCGCAATATACGCCTATATCATCGCCTGCGGATCATGATCTAACCCTTTTTACCGTCTCCAAAAGCACCGGTCATGCTGGAATGCGCATAGGgTGGGCTTTAGTCAAAGACAAAGAGGTAGCAAAGAAAATGACCAAGTTCATAGAGCTCAACACAATAGGAGTCTCAAAGGATTCACAACTCAGGGCTGCTAAGGTATTAAGAGCGGTTTCTGACAGTTGTGAACAAGAAAACTCTCAAGAGGGTGACTCATTCTTCAAGTTCAGCCACAAGATCATGACCAACAGGTGGAAGCAGCTGAGAGAAGTAGTGCAGCATAGTGAATTGTTCAGTATGCCACAATTTTCTCCTGCTTTTTGTAACTTTTTCAATCAGGTGTTGGAACCTCAACCAGCTTTTGTGTGGTTAAAGTGTGAGGGAAATGTGGAAGACTGTGAAAGCTTCCTTAGAGTACACAACATCATAACAAGAAGTGGAAAACACTTTGGGGTTAGCCCAAAATATGTAAGAATTAGCTTGTTGGATACTGATGAAAAGTTTACTCAATTTCTAGACAGACTATCTACCATACAGTCTCTGTAg 1377 0.4009 MAKIPNTGVFSSRHLLMLSLALNVSLILKMMYEGEEVHNNNNSCLKNERGTSITTRADFDTKGHSSNIHKSRLVMSTTSSLVNSTCTDLTRGNNRIINLDHGDPTVYERYWRQTGDKTTIIIPGWQSMSYFSDVSNICWFLEPEFAKEVVRLHKVVGNAVTDGRHIVVGTGSSQLFLAALYALSPSHASQPISVVCASPYYSSYPSMTDYLKSGLYKWAGDADSYEKDGPYIELVTSPNNPDGHLRKSKVNRSQGLLVHDLAYYWPQYTPISSPADHDLTLFTVSKSTGHAGMRIGWALVKDKEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSCEQENSQEGDSFFKFSHKIMTNRWKQLREVVQHSELFSMPQFSPAFCNFFNQVLEPQPAFVWLKCEGNVEDCESFLRVHNIITRSGKHFGVSPKYVRISLLDTDEKFTQFLDRLSTIQSL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02284 458 Gene3D - 66 137 IPR037029 GO:0016846
Tsu03g02284 458 Gene3D - 142 345 IPR015421 GO:0003824
Tsu03g02284 458 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 457 - -
Tsu03g02284 458 Gene3D Aspartate Aminotransferase, domain 1 348 456 IPR015422 GO:0003824
Tsu03g02284 458 CDD AAT_like 143 452 - -
Tsu03g02284 458 Pfam Allinase 97 455 IPR006948 GO:0016846
Tsu03g02284 458 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 1 457 - -
Tsu03g02284 458 SUPERFAMILY PLP-dependent transferases 95 454 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02284 Tsu-Chr3 25658506 25666688 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02284 K16903 - gmx:100820582 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02284 03 25658506 25666688 Tsu03g02284 03 25658506 25666688 ECH
Tsu04g02599 04 29332712 29341992 Tsu03g02284 03 25658506 25666688 PCT