Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02590 ATGATGAAGAATCCTAAGCTGGAAGAGGAAAGGAGGCTTGAAgaggagctcttgataccaatccTAATGGGGGAGCATGTGATAAAATTGGCAGAGGAAGCAAAATCATCGAAGGTAGAATGTCGAGAACTGGCTACGAAGGTGAAGGTACTCTGCAACAGTCTCCGAGGTGTCGTCCGAGTGGTTTCAGAGAACCACCAATCGTTGAACGAGAGACCAATCCGACGCATGCTGAAGGAACTATTGAAGAGTTTGGAAAAAACGCTCGCACTCGTGCGAAAATGTAAGAATCAAGGAGGTGTCGGTGTACTGAAAAACGTGTTGACGATAAGGAGTACCGGTGATTTTCGAAAAGTCTGGAGTCTTCTGGAATCATCAAACGGTGATATGTTGTGGTTGGTGAACATTTTTGAGTCTAGAGGGACTAATATTGCGCTATCTCCTATTACTAATAACGATCCAATTTTGGCGTGGGTATGGACTTATATTTATACCCTTCAGCTTGGTAACCCTAATGATCGTGCTGAAGCCGCAACGGAACTAGGTTCCCTGGCTCGAATTACTGACCGGAACAGGTTCATCATCATGGAGGAAGGTGGTGTTTTGCCTCTGCTCAAGGTTCTTAAAGATTTTGCTTTCCCTGATTGTCAAGTTGCTGCTGCCAATGCTCTTGCTAACGTTATTTCCGATGATCAACAAAAGATCGTTGGATTCCTTCTCAACAACCTCGCTGTTCCTGTTATTGTTCAGGTTCTATCGGATGCAGTATTTAGAGTTCGCGTTTCTGTTGCTAATTTGGTGTCTGCTATGGCTGATCAAGAGCCTCTTGCTCGCGAGGAGTTTATTAAGGCTAATGTTACGAAACCTCTTGTGTCTTTGTTGTCTATTGATACTGTTCTTGTTGAACCTGTCGCTGCACGAAACGGCATTTATTCTGTGGTTCAAAATTTATCTGAGGCTGATTCTGATGGAAGCAGTGGCAGAGGAAGAGAGGCTGATCAAAGCCCGGAATTAAGGAATGATGTTAAAGTTAGTTGCGCTAAGGCTCTTTGGAAACTTTCCAAAGGGTGTCTTTTGGCTTGCAAGAAGATTACTGAGACTAAAGGGTTGCTTTGTCTGGCTAAGATTGTTGGGTCTGAGAGTGGAGAATTGAGACTCAATTGTCTCATGGCTATTATGGAAATTGCGGCCGTGGCAGAATCCAATGTTGAACTTAGAAGGGGCGCTTTAAAATCCACTGCGCCCGCAGCAAAGGCAGTTTTGAATCAGCTTTTGAGAGTGGTTCGACAAGAGAATGATTCTTCGTTGCTGATTCCTGCCATCAAGTCAATTGGCTCCTTGGCCAGAAACTTTCCTGGAACGGTTCCTCATATTCTCGGTCCTTTAGTTACACACCTTGGAAACAAGGATATGAATGTGGCAAGTGAAGTTATTGTTGCCTTGGTAAAGTTTGTGTGCGTCGAAAATTACAACTGCGTCGACCATTCTAAGGTAATACTCGAGCTTGATGGAATTCCTAAGCTAATGATTCTGTTGAAGATAAATGGTCGTCAACAAGTGTACGGCCTAAAATTACTTTGTTATCTCGCCTTAAATGTTGGCAATAGTAAGGTTCTTGAGCAAGAACGTGTATTGAGTTCTTTAGACAAGCTCGGTCATCTTGTTCTAGCGCAAAATCCTGATTTAAAGGAACTGTTTGCAAAGGCTATTCACCACCTCACTCTTTATCAGCCAGGAGTTCAATTCCACAGACAGCCCTTGGCATATGCACTATAA 1776 0.4291 MMKNPKLEEERRLEEELLIPILMGEHVIKLAEEAKSSKVECRELATKVKVLCNSLRGVVRVVSENHQSLNERPIRRMLKELLKSLEKTLALVRKCKNQGGVGVLKNVLTIRSTGDFRKVWSLLESSNGDMLWLVNIFESRGTNIALSPITNNDPILAWVWTYIYTLQLGNPNDRAEAATELGSLARITDRNRFIIMEEGGVLPLLKVLKDFAFPDCQVAAANALANVISDDQQKIVGFLLNNLAVPVIVQVLSDAVFRVRVSVANLVSAMADQEPLAREEFIKANVTKPLVSLLSIDTVLVEPVAARNGIYSVVQNLSEADSDGSSGRGREADQSPELRNDVKVSCAKALWKLSKGCLLACKKITETKGLLCLAKIVGSESGELRLNCLMAIMEIAAVAESNVELRRGALKSTAPAAKAVLNQLLRVVRQENDSSLLIPAIKSIGSLARNFPGTVPHILGPLVTHLGNKDMNVASEVIVALVKFVCVENYNCVDHSKVILELDGIPKLMILLKINGRQQVYGLKLLCYLALNVGNSKVLEQERVLSSLDKLGHLVLAQNPDLKELFAKAIHHLTLYQPGVQFHRQPLAYAL 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02590 591 Gene3D - 159 410 IPR011989 -
Tsu04g02590 591 PANTHER ARMADILLO REPEAT ONLY 4 8 588 - -
Tsu04g02590 591 Coils Coil 78 98 - -
Tsu04g02590 591 Gene3D - 411 581 IPR011989 -
Tsu04g02590 591 SUPERFAMILY ARM repeat 59 571 IPR016024 -
Tsu04g02590 591 Gene3D - 20 134 IPR036537 GO:0007166
Tsu04g02590 591 PANTHER ARMADILLO REPEAT ONLY 1 PROTEIN 8 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02590 Tsu-Chr4 29247637 29249843 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02590 - - gmx:100813824 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02590 04 29247637 29249843 Tsu04g02590 04 29247637 29249843 ECH
Tsu04g02590 04 29247637 29249843 Tsu03g02299 03 25906780 25913804 PCT