Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02578 ATGCAAGACTCGATCGGTATACCTACTTGCTTTTCATCAACCGAGAAGCTAAGTGATGATCACGGAGCTGGCGTGGCTCGTTCCGGGCAAAGTGTTTACATGTCAGTATACAGAACAAAGATAGCTGATCATTGCCGTTTGATAACAATCACATGGTGCAAAAATCTGTTACTTCATGGGCTATCAATATCAGTAGAAGGTCCAGAAGGAGAAGCTCAATATGCCTGCAAGATTGAACTAAAACCATGGTATTTTTGGAGAAAACAAGGATCAAAGAAATTTGTAGTAGATGGTAATAAAGCAGTAGACATATTCTGGGACCTTAAAGGTGCTAAATTCAATGGAGAAACAGAACCAACTTCAGAATACTATGTAGCTGTTGTTTGTGATGAAGAGGTTGTTCTTCTTCTTGGTGATCTTAAAAAAGATGCTTATAGAAGAACAGGTTGTAGACCAGCACTTATTGATCCAATATTAGtttcaaaaaaagaacataTTTTTGGTAAGAAGAAATTCTCAACAAGAGCTAAGTTTCATGAGAAAGGTAAGTGGCATGAGATTTCAATTGAATGCAAGAATAGAGGAAATGGAAATGGTGGTGATTCTTTTGTTGTTGGATCAGTTCAACCAGAAATGGAGATAAGAATTGATGGTCATTTGGTGATTCATGTGAAGCATTTACAATGGAAATTTAGAGGTAATGAATCAGTTCATCTTAGTAAAATGAGAATTGAAGTTTATTGGGATGTTCATGATTGGTTATTTAGTCCTGGTTTAAAACatgctttgtttatttttaaaccTATTTTATCATCTACTATTTCTTCTTGTTCATCTTCTCCTTTATCTATTCAAGCAAGGAGTGTTGAATCAGTTGAAGGATTTAGTGTAAGTGGTTCATCagaattttgtttgtttctttatgCTTGGAAGGTTGAATGA 942 0.3376 MQDSIGIPTCFSSTEKLSDDHGAGVARSGQSVYMSVYRTKIADHCRLITITWCKNLLLHGLSISVEGPEGEAQYACKIELKPWYFWRKQGSKKFVVDGNKAVDIFWDLKGAKFNGETEPTSEYYVAVVCDEEVVLLLGDLKKDAYRRTGCRPALIDPILVSKKEHIFGKKKFSTRAKFHEKGKWHEISIECKNRGNGNGGDSFVVGSVQPEMEIRIDGHLVIHVKHLQWKFRGNESVHLSKMRIEVYWDVHDWLFSPGLKHALFIFKPILSSTISSCSSSPLSIQARSVESVEGFSVSGSSEFCLFLYAWKVE 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02578 313 PANTHER EXPRESSED PROTEIN 1 313 IPR008586 -
Tsu04g02578 313 Pfam Plant protein of unknown function (DUF868) 28 311 IPR008586 -
Tsu04g02578 313 PANTHER OS01G0909400 PROTEIN 1 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02578 Tsu-Chr4 29073990 29075985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02578 7 313 EF-hand Containing Proteins AT5G28150 36.452 5.75e-67 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02578 - - lja:Lj4g3v1415290.1 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02578 04 29073990 29075985 Tsu03g02320 03 26251233 26252381 PCT