Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02320 ATGCAAGACTCAATTGgaattcctgcatgtttttctTCTACAAGTGatgatcatcatcttcatcatggAGCTGTGACACGTTCAGGAAGAAGCGTTTACATGTCAGTATACAGAACAAAATTAGCTGATCAATGCCGTTTGATCACAATCACATGGTGCAAAAACTTGATGCTTCATGGTTTATCAGTATCAGTAGAAAGTCCTGAAAAAGAAACTCAATATAGCTGCAAAGTTGAGCTAAAACCATGGTACTTTTGGAGGAAACAAGGTTCGAAACGGTTCGCGGTTGATGGTAAAGCAGTAGATGTTTTTTGGGACCTTAAATCTGCAAAATTCAATGGTGAaactgaaccatcttcagattACTATGTAGCAATTGTTTGTGATCAAGAGGTTGTTCTTCTTCTTGGTGATTTAAAGAAAGAAGCTTACAAAAGAACTGGATGTAGACCATCACTTATTGATCCAATTCTTGTTTCAAAAAAGGAACATATATTTGGTAAGAGAAAGTTTTCTACTAAAGCTAAGTTTCATGAGAAAGGTAGGAGTCATGAGATTTCTATTAAGTGTAAGAACAAAGGaagtaatagtaatagtaatagtaatgtTGTTGGTGATGAAGATTCTGTTAAGAGTGGTGTTGTTGGTGTTCAAGTTCAAGTTCAACCAGAAATGGAGATAAGATTTGATGGACACTTGGTGATTCATGTGAAGCATTTACAATGGAAATTTAGAGGGAATGAAATAATTCATCTAAACAAAATGAGAGTTGAGCCTAACGGTGTTGTTATTATAATCATATCATCAATCAGGCCTCAGGCTCAGACTCAGACTCAGGATCGAATTCTAAGATTTACGATGAGTTTGACAGAATCACggtaa 882 0.3243 MQDSIGIPACFSSTSDDHHLHHGAVTRSGRSVYMSVYRTKLADQCRLITITWCKNLMLHGLSVSVESPEKETQYSCKVELKPWYFWRKQGSKRFAVDGKAVDVFWDLKSAKFNGETEPSSDYYVAIVCDQEVVLLLGDLKKEAYKRTGCRPSLIDPILVSKKEHIFGKRKFSTKAKFHEKGRSHEISIKCKNKGSNSNSNSNVVGDEDSVKSGVVGVQVQVQPEMEIRFDGHLVIHVKHLQWKFRGNEIIHLNKMRVEPNGVVIIIISSIRPQAQTQTQDRILRFTMSLTESR 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02320 293 PANTHER OS01G0909400 PROTEIN 1 258 - -
Tsu03g02320 293 Pfam Plant protein of unknown function (DUF868) 29 258 IPR008586 -
Tsu03g02320 293 PANTHER EXPRESSED PROTEIN 1 258 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02320 Tsu-Chr3 26251233 26252381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02320 27 258 EF-hand Containing Proteins AT5G28150 40.086 4.91e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02320 - - gmx:100779755 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02320 03 26251233 26252381 Tsu03g02320 03 26251233 26252381 ECH
Tsu04g02578 04 29073990 29075985 Tsu03g02320 03 26251233 26252381 PCT