Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02551 atgaaagagaaTAAAGCATTTTTCCGATTACAGCATCTCTGCGTAATTTCACTCATTCTGATCCGCGTCGCACTCACCGCTAAGATCACAGCCACAACTCCGTCACCACTCTCCCTCTCTAGGATGGAGCAATACTGGTCTGGTAGTGCCATGAATAAGAGCAAAGGGATGGTGGAGAATTTACAGAGTTATGGAATAATCAAATCTAGAAAGGTAGCTGAAGTAATTGAAAACATTGACAGAGGTTTATTTGTACCGAATGGGGTTCAACCTTACATAGACAGCCCTATGTCTATAGGCTACAATGCCACTATATCTGCACCACATATGCATGCAACCTGTCTTCAGTTGCTTGAGAATTATTTGCAACCTGGAATGCATGCTCTCGACGTTGGCTCCGGGACTGGGTACCTGACAGCATGTTTTGCTTTGATGGTTGGACCCGATGGTCGTGCTGTTGGTGTGGAACACATTCCTGAATTGGTTTCCTTTTCAATTAAGAATATTGAAAAAAGTGCCGCAGCTCCACTATTGAAAGATGGCGCCCTTTCTGTGCATGAGTGTGATGGAAGGCAGGGTTGGCCTGAGTTTGCTCCTTATGATGCCATTCACGTTGGAGCAGCAGCACCAGAAATTCCCCAGCCACTTATTGATCAGTTGAAGCCGGGCGGTCGAATGGTTATTCCAGTTGGAAACATATATCAAGATTTGAAGGTTGTGGACAAGAAGTCCGATGGTTCTATCAGTATCCGGACAGAGACCTCTGTTCGATATGTGCCTCTCACTAGCAAGGAAGCTCAACTTAAAGGGGAATAA 816 0.4473 MKENKAFFRLQHLCVISLILIRVALTAKITATTPSPLSLSRMEQYWSGSAMNKSKGMVENLQSYGIIKSRKVAEVIENIDRGLFVPNGVQPYIDSPMSIGYNATISAPHMHATCLQLLENYLQPGMHALDVGSGTGYLTACFALMVGPDGRAVGVEHIPELVSFSIKNIEKSAAAPLLKDGALSVHECDGRQGWPEFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIYQDLKVVDKKSDGSISIRTETSVRYVPLTSKEAQLKGE 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02551 271 CDD AdoMet_MTases 129 230 - -
Tsu04g02551 271 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 30 270 IPR000682 GO:0004719|GO:0036211
Tsu04g02551 271 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 55 236 IPR029063 -
Tsu04g02551 271 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 53 267 IPR000682 GO:0004719|GO:0036211
Tsu04g02551 271 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 54 265 - -
Tsu04g02551 271 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 30 270 - -
Tsu04g02551 271 Gene3D Vaccinia Virus protein VP39 46 270 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02551 Tsu-Chr4 28754986 28757273 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02551 K00573 - gmx:100527082 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02551 04 28754986 28757273 Tsu04g02551 04 28754986 28757273 ECH
Tsu04g02551 04 28754986 28757273 Tsu03g02334 03 26369457 26372779 PCT