Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02334 ATGAATGCGAGCTATAGCTATTTTCCTGTATTGGTGGCGTATGATTCCCGCGTGTCTTCTTCTTGTTATGCAACAACAACATCACGCACTTTTCATCACCGTTCTCTTGTTTCTCTATCTTTATCTTTCTCTAAGttccaaaaccctaatttcctCACGGGGAACACTATCTTCCTTAAGATGCAGCGGTTCTGCTCTGTGAGTGGCATAAGTAAGAACAAAGCAATGGTGGAGAGGTTGCAACATTTTGGAGTAATCACATCAAGTAAGGTGGCTGAAGTGATGGAGACTGTTGATAGAGGTTTGTTTGTACCCAGTGGATCAGCACCTTATGATGATAGTCCCGTGGCCATAGGCTACAATGCCACTATATCTGCACCTCACATGCATGCTACCTGCCTTCAGTTACTGGAAGAGAATTTGCAACCTGGGATGCACGCCCTCGACATTGGCTCCGGAACAGGGTATCTGACTGCGTGTTTTGCGTTGATGGTTGGACCCCAAGGCCGTGCTGTTGGCGTAGAGCATATTCCTGAATTGGTTTCCCttgcaaaagaaaatattcaGAAAAGTGCTGCAGCTACACTATTGAAAGATGGTTCCCTTTCTGTTCATGTTGGTGATGGAAGGGAAGGTTGGCCAGAATTTGCTCCTTATGATGCCATTCACGTTGGAGCAGCAGCACCAGAAATTCCTCAACCACTTATCGACCAGTTGAAGCCTGGTGGGAGAATGGTAATTCCTGTTGGTAACATATTTCAAGATTTAAAGGTGGTGGATAAGAATTCTGATGGTTCTATCAGTGTCCGGACTGAGACCTCCGTTCGTTATGTGCCCCTCACTAGTCGAGATGCTCAACTTCGTGGCTACTAA 873 0.4422 MNASYSYFPVLVAYDSRVSSSCYATTTSRTFHHRSLVSLSLSFSKFQNPNFLTGNTIFLKMQRFCSVSGISKNKAMVERLQHFGVITSSKVAEVMETVDRGLFVPSGSAPYDDSPVAIGYNATISAPHMHATCLQLLEENLQPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVSLAKENIQKSAAATLLKDGSLSVHVGDGREGWPEFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVVDKNSDGSISVRTETSVRYVPLTSRDAQLRGY 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02334 290 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 207 222 IPR000682 GO:0004719|GO:0036211
Tsu03g02334 290 CDD AdoMet_MTases 148 249 - -
Tsu03g02334 290 Gene3D Vaccinia Virus protein VP39 67 290 IPR029063 -
Tsu03g02334 290 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 72 284 - -
Tsu03g02334 290 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 73 258 IPR029063 -
Tsu03g02334 290 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 71 286 IPR000682 GO:0004719|GO:0036211
Tsu03g02334 290 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 43 290 IPR000682 GO:0004719|GO:0036211
Tsu03g02334 290 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 43 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02334 Tsu-Chr3 26369457 26372779 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02334 K00573 - gmx:100810913 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02334 03 26369457 26372779 Tsu03g02334 03 26369457 26372779 ECH
Tsu04g02551 04 28754986 28757273 Tsu03g02334 03 26369457 26372779 PCT