Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01748 ATGGATAAATCATCCAACTTTGGTGAAAATTGTGATGTGAGGTATCACCTTTCACCTTCTATGGATCATTCAGTTAGTGAAACTCCTTTTTCTAGACTGAGTGGTGATTCTTTCGGATACTGCCGAGTTTGGACAAGCTCAGAGgcatcaaattcaaatttctctGACACTCTCGATGATAGCAGCTATGCCAGTGAACCTTCTCCTTTGCTTTCACCTTCACCTTCTAGGTGGAGGGATGTTAAACCTGGTCTTTCTAGGCTAGGAACGAAGCTGTGCAAGCAATCGGTCGATGATAAACTTGATGATAATGATCTCTTGGATTCAGGTGAGCTTGAAATGATGAAGGAAAGATTCGCAAAACTTCTACTAGGAGAAGACATGTCTGGTGGAGGGAAAGGTGTTTCCACCGCAGTTACAATCTCAAATGCCATTACCAATCTCTACGCAACAGTATTTGGACAAAGTTTAAAGTTGGAGCCGCTGAAGCCAGAGAAGAAAGCCATGTGGAAAAGGGAAATGAAGGTTCTTTTATCAGTGTGTGATTACATACAAGAATTTGCCCCAACTGCACAATATTTAGAAGATGGCACAATTGTGGAAATGATGAAAAGCAGACCAAGGTCAGATATCTATATCAACCTCCCAGCACTACAGAAGCTTGACACAATGCTTACAGAAATATTAGATTCTTTTGAGGATACTGAATTCTGGTATGCAGAGAATAAATCAGCAAGTTCGCCTCGTTTACGCGCAGCCTCATTTCGGAAAATTGTTCCAAGGAAAGATGAGAAATGGTGGTTACCAGTTCCTTGTGTTCTCCCCGGTGGCCTCTCTGGGAAGTCAAGGAAACACCTTACAGAGAAAAGGGATTGTGCTAATCAAATTCATAAAGCGGCAATGGCAATAAATAGCAATATTCTGGCGGAAATAGATATTCCAGAAACATATATAGATGATCTTCCAAAGCTGAAAATCTATTGCCAAGTGATTGAGGATTCCTTTAAATGTGACCCTATAAGACAAATGTCTTGGAATTTATCATCAAATTTCATAAGCCTTTTATGGAAGCCAATAATAGCAGCTGAATCTTGTAGAAAACGGGACGATATAATTTCATATAAGAGTGGAAGAGGAAGTCTAGGAGACACAATTTACCACTATATGTATACTGCTGACAAGTTCTCACCCGATCGCCTTCTTGACTGTCTCAAAATAAGTTCTGAGCATGAAGCACTCGATCTAGCAGACAGGGTCGAATCATCGATGTACACGTGGAGACGTAAAGCTTGTCTTAGCCATTCAAAGTCTTCATGGAAAGAAGTAAAAGGTCTTATGGATGACACGGATTGGAAGGACAAAAACTACATCTTAGCTGACAGAgctgaagctttgttgtttagCCTCAAGCAAAGATATCCTgaactttcacaaacttcttTGGATACATGCAAGATCCAATACAACCGGGATGTGGGGAAAGCAGTACTAGAAAGCTATTCAAGAGTTTTAGAAGGCCTGGCATTCAACATAGTTGCTTGGATTGAAGATGTTCTATATGTAGATAAATCAATGACAAATCGAGAAGTCTAG 1593 0.3898 MDKSSNFGENCDVRYHLSPSMDHSVSETPFSRLSGDSFGYCRVWTSSEASNSNFSDTLDDSSYASEPSPLLSPSPSRWRDVKPGLSRLGTKLCKQSVDDKLDDNDLLDSGELEMMKERFAKLLLGEDMSGGGKGVSTAVTISNAITNLYATVFGQSLKLEPLKPEKKAMWKREMKVLLSVCDYIQEFAPTAQYLEDGTIVEMMKSRPRSDIYINLPALQKLDTMLTEILDSFEDTEFWYAENKSASSPRLRAASFRKIVPRKDEKWWLPVPCVLPGGLSGKSRKHLTEKRDCANQIHKAAMAINSNILAEIDIPETYIDDLPKLKIYCQVIEDSFKCDPIRQMSWNLSSNFISLLWKPIIAAESCRKRDDIISYKSGRGSLGDTIYHYMYTADKFSPDRLLDCLKISSEHEALDLADRVESSMYTWRRKACLSHSKSSWKEVKGLMDDTDWKDKNYILADRAEALLFSLKQRYPELSQTSLDTCKIQYNRDVGKAVLESYSRVLEGLAFNIVAWIEDVLYVDKSMTNREV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01748 530 MobiDBLite consensus disorder prediction 50 78 - -
Tsu04g01748 530 MobiDBLite consensus disorder prediction 50 72 - -
Tsu04g01748 530 ProSiteProfiles PRONE domain profile. 102 530 IPR005512 GO:0005085
Tsu04g01748 530 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 530 IPR038937 GO:0005085
Tsu04g01748 530 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 530 - -
Tsu04g01748 530 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 375 526 IPR005512 GO:0005085
Tsu04g01748 530 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 111 324 IPR005512 GO:0005085
Tsu04g01748 530 Gene3D PRONE domain, subdomain 1 489 523 - -
Tsu04g01748 530 Gene3D PRONE domain, subdomain 1 105 344 - -
Tsu04g01748 530 Gene3D PRONE domain, subdomain 2 375 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01748 Tsu-Chr4 18672257 18675162 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01748 - - gmx:100806086 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01748 04 18672257 18675162 Tsu08g01085 08 11870595 11874499 PCT