Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01738 ATGTCATTGGGTGAACATGAGAAAAAGGCAAAGAAAGAGAAGAGCGTGAAGGAGGACAAGGACAAGTCAATCGCTCTAAAGAGCAAGTCCAAAAAGTCCAATGGAGAAGAACATATTAATGGTGATGAAAGTGAAAATGACCCGGATGATGAGGATATGGAATTATTTGTTCGAAGATTCAAGAAATACATAAAAGGAAATGGTGTAGAATTCACGGCTAATAGACTGCGGCTGGTGATCGGCAATGTGATTTTTGAATCTCAAACTGCGATTGTGAAGGATATGCAGATTCTAGATGGGATCCTCATTGCAAATGAGGCGGTGGATGAGGCACGCAAATCTAAAAAAGAGATGATATTATTCAAGGAGGATTTTGAGAAAGCCCGTGATTCGGTAGATTGGGGCTATTTAGATGTTGTTATGGGGAGAATGTCTTTCCCGACTTTGTGGAGAAAGTGGATGAAAGAGCGTATAGAGCTACTCAACGTGGATGCTCACCTTTTGGGTGATGGCCGTTGGGGATTAGGGTGGATTGTGCGGAGGGAGGATGGTAGTTGGGTTGGAGCTGCGACCAAGGTGGTGCGAGTTGATTGGAACACCCACATCAACCGGTCTGATCCTATCAAAACAAGAAGCACTTATCCTATCAAAAGGCAAGAAATCAAATACACACTTAACTGCTTCAATGGAAGCCAGACAAGAACCTGCCCAAAGGATCATTCCCTAATTCAAACATTCAAACAAGATCAAGATTCATCATCAACATGTCCAGAGTACTTTAAATGGATTCATGAAGATCTAAAACCATGGAAGAGTACAGGAATCACAAGGGAAATGGTGGAGAGTGGAAAAAACATTTCACAGCTTAGAATTGTGATTAAACAAGGAAAAACTTATGTAGAAACTTATGGAGATTCATATCAAACAAGGGACTTGTTTACCGTATGGGGAATTGTACAGCTTTTAAGGTTGTACCCTGGGAGAGTACCAGATTTGGAGCTATTGTTTGAGACTGGTGACAAAACTGTGTTGGATAAACAAAAGTTTCAAGCTGTAGCACCACCACCTATTTTTAGTTATTGTGGACAGAATAATGCTCTTGATATTGTCTTTCCTGATTGGTCCTTTTGGGGTTGGGCTGAGACTGGAATAAAACCTTGGGAGAAAGTGTTGAAGGACATACACGAAAGCAACAAGAAGATCAAATGGAAGGATAGGGTACCCTATGCCTTTTGGAAAGGAAACACACATGTGTCCCCAACAAGGTTTAAGCTTAGAATGTGCAATAACACAGACCAACATGATTGGAATGCTCATATATATTCACTgCACTGGAGTAAGGAAATTAAAAAAGGGTTCAAGAACACAAAATTAGAAGATCAATGTACACACAGGTACAAGATTTATGCTGAAGGGGTATCATGGTCAGTgagtgaaaaatatataatagcaTGTGACTCAATGACCTTGTTCATAAAGCCAAGATATTATGATTTCTTTTCAAGAAGCTTAGTACCTTATATGCACTTCTGGCCCATCAGCAAGCAAAACATGTGCGAAGATATTAAGTATGCGGTAGATTGGGGCAATACACATCCAGAGAAGGCAGAAGCTATTGGCAGAGAAGGGACAAAGTTCATAGAAGAGAATGTAAAGATGAAGTTAGTGTATGATTATATGTTACATCTATTGACTGAATATGCAAAGCTCTTGAAATTTGAACCAACCATACCTCCACAAGCTTTTGAGGTTTGTTCTGAAAATTTGGCATGTCCAGTGAATGGTATATGGAGGGAATGTATGATTGAGTCCCTGGTTAAGTCGCCAAGTGATACACCTCCATGTGCAATGAAaggataa 1860 0.3962 MSLGEHEKKAKKEKSVKEDKDKSIALKSKSKKSNGEEHINGDESENDPDDEDMELFVRRFKKYIKGNGVEFTANRLRLVIGNVIFESQTAIVKDMQILDGILIANEAVDEARKSKKEMILFKEDFEKARDSVDWGYLDVVMGRMSFPTLWRKWMKERIELLNVDAHLLGDGRWGLGWIVRREDGSWVGAATKVVRVDWNTHINRSDPIKTRSTYPIKRQEIKYTLNCFNGSQTRTCPKDHSLIQTFKQDQDSSSTCPEYFKWIHEDLKPWKSTGITREMVESGKNISQLRIVIKQGKTYVETYGDSYQTRDLFTVWGIVQLLRLYPGRVPDLELLFETGDKTVLDKQKFQAVAPPPIFSYCGQNNALDIVFPDWSFWGWAETGIKPWEKVLKDIHESNKKIKWKDRVPYAFWKGNTHVSPTRFKLRMCNNTDQHDWNAHIYSLHWSKEIKKGFKNTKLEDQCTHRYKIYAEGVSWSVSEKYIIACDSMTLFIKPRYYDFFSRSLVPYMHFWPISKQNMCEDIKYAVDWGNTHPEKAEAIGREGTKFIEENVKMKLVYDYMLHLLTEYAKLLKFEPTIPPQAFEVCSENLACPVNGIWRECMIESLVKSPSDTPPCAMKG 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01738 619 Pfam Glycosyl transferase family 90 252 617 IPR006598 -
Tsu04g01738 619 MobiDBLite consensus disorder prediction 1 41 - -
Tsu04g01738 619 SMART cap10 328 574 IPR006598 -
Tsu04g01738 619 MobiDBLite consensus disorder prediction 1 50 - -
Tsu04g01738 619 PANTHER GLYCOSYLTRANSFERASE FAMILY 90 PROTEIN 210 605 - -
Tsu04g01738 619 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 210 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01738 Tsu-Chr4 18516250 18524662 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01738 - - mtr:MTR_7g076860 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01738 04 18516250 18524662 Tsu06g03130 06 41531414 41538338 ECH
Tsu04g01738 04 18516250 18524662 Tsu04g01738 04 18516250 18524662 ECH