Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01706 ATGgccaattcttcatcatctttatcaattctttttCACAATTTCACTTCCAAGAAACCCAATAAACCATTCACTAGACTCTACTTTCTCACCTTCACCATCTTCCTCTGTACTTTCTTTTACTTTCTTGGTCTCTGGCAAAACTCCACAACCACCACCTCCTCCTCCgccgccaccaccaccaccatcatccGTCCTAATTGCCAACAAACCAATTTCACCACCACCTCAACATCAACCCCTTCCACCAAGCTCGATTTCTCCTCCCACCACCACGTCGACATACCAGAACAAACCACCGCGCGTGTAAATCACGCTCCGGTTTGCGATGTCTCACTCTCAGAGTACACTCCCTGTGAGGACGTGCAGCGATCGCTGAAATTCCCACGAGAGAATTTAGTCTATCGTGAGAGACACTGTCCGGAGAAAGACGAGATTCTCCGGTGTCGTATTCCGGCACCATTTGGTTACCGTGTTCCGCCACGGTGGCCGGAGAGCCGTGATTGGGCTTGGTATGCTAATGTGCCGCATAAAGAATTAACGATTGAGAAAAAAAACCAGAATTGGGTTCATTTCGAAGGTGACCGGTTCAAATTTCCGGGTGGTGGAACCATGTTTCCACGTGGCGCTGGTGCGTACATTGATGATATCGGAAAACTCATCAACCTTAAAGATGGGTCCATTCGAACCGCTTTAGACACCGGTTGTGGGGTTGCAAGTTGGGGAGCTTATCTTTTGCCACGTAACATAATAGCAGTTTCATTTGCACCAAGAGATACACATGAAGCTCAAGTTCAATTTGCTCTTGAACGAGGAGTTCCAGCTTTGATTGGTGTTATTGCCTCAATTAGGCTTCCTTACCCTTCAAGATCCTTTGACATGGCTCATTGTTCACGTTGCCTAATTCCTTGGGGCCAAAATGATGGAATTTATTTGGCTGAAGTTGATAGAGTGCTACGTCCCGGAGGGTATTGGATTCTATCAGGGCCACCAATAAACTGGGAGACCCATTGGAAAGGATGGGAGAGGACTAAAGAGAGTCTAAATGAAGAACAGAATTCAATTGAGAGAGTGGCAAAGAGTCTATGttggaaaaaaattgtacaGAAGGGTGACATTGCAATATGGCAAAAGCCTACTAATCATATACATTGTAAAATTACAAGAAAAGTCTTCAAGAATAGACCTTTTTGTAGAGCAGAAGATCCTGACTCAGCATGGTACACCAAAATGGATACATGCTTGACACCACTACCTGAAGTAACTGACATAAAAGATATTAGTGGTGGAAGATTATCTAATTGGCCTGAGAGACTAACATCAATTCCACCAAGGATTAGCAGTGGAAGTTTGACAGGAATCACAGCTGAGATGTTCAATGAAAATACTGAATTATGGAAGAAGAGAGTTGCATATTACAAGACACTTGATTATCAGCTAGCAGAGCCCGGGAGATTCCGTAATTTGCTTGATATGAATGCTAACTTGGGAGGCTTTGCAGCTGCAATGATTGATGATCCTGTTTGGGTCATGAATGTTGTTCCCGTCGAGGCTGAGATTAACACACTTGGTGTCGTTTATGAACGCGGATTGATTGGAACATATCAGAACTGGTGTGAAGCCATGTCCACTTATCCTCGAACTTATGACTTCATACATGCCGATTCTGTTTTTAGCCTCTACGAGAACAGATGTAATATAGAGGACATTCTTCTTGAGATGGATAGGATTTTGAGGCCACAAGGGAGTGTGATATTGCGCGACGATGTGGATGTGTTGTTAAAGGTAAAGAGATTTGTAGATGCAATGCAATGGGATGCTAGAATTGCAGACCATGAAAAAGGACCACACCAAAGAGAAAAGATACTAATAGCAGTGAAGACATATTGGACAGCAGCAGCACCTGAACAAAATCAACAGAGAAAGctataa 1932 0.4203 MANSSSSLSILFHNFTSKKPNKPFTRLYFLTFTIFLCTFFYFLGLWQNSTTTTSSSAATTTTIIRPNCQQTNFTTTSTSTPSTKLDFSSHHHVDIPEQTTARVNHAPVCDVSLSEYTPCEDVQRSLKFPRENLVYRERHCPEKDEILRCRIPAPFGYRVPPRWPESRDWAWYANVPHKELTIEKKNQNWVHFEGDRFKFPGGGTMFPRGAGAYIDDIGKLINLKDGSIRTALDTGCGVASWGAYLLPRNIIAVSFAPRDTHEAQVQFALERGVPALIGVIASIRLPYPSRSFDMAHCSRCLIPWGQNDGIYLAEVDRVLRPGGYWILSGPPINWETHWKGWERTKESLNEEQNSIERVAKSLCWKKIVQKGDIAIWQKPTNHIHCKITRKVFKNRPFCRAEDPDSAWYTKMDTCLTPLPEVTDIKDISGGRLSNWPERLTSIPPRISSGSLTGITAEMFNENTELWKKRVAYYKTLDYQLAEPGRFRNLLDMNANLGGFAAAMIDDPVWVMNVVPVEAEINTLGVVYERGLIGTYQNWCEAMSTYPRTYDFIHADSVFSLYENRCNIEDILLEMDRILRPQGSVILRDDVDVLLKVKRFVDAMQWDARIADHEKGPHQREKILIAVKTYWTAAAPEQNQQRKL 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01706 643 Gene3D Vaccinia Virus protein VP39 182 383 IPR029063 -
Tsu04g01706 643 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 115 627 IPR004159 GO:0008168
Tsu04g01706 643 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 457 603 IPR029063 -
Tsu04g01706 643 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 15 636 IPR004159 GO:0008168
Tsu04g01706 643 PANTHER GENERIC METHYLTRANSFERASE 15 636 - -
Tsu04g01706 643 CDD AdoMet_MTases 230 324 - -
Tsu04g01706 643 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 137 351 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01706 Tsu-Chr4 18118041 18122950 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01706 - - gmx:100794369 1047.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01706 04 18118041 18122950 Tsu04g01706 04 18118041 18122950 ECH
Tsu08g01170 08 12925766 12932521 Tsu04g01706 04 18118041 18122950 ECH