Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01704 ATGGGTCACCCCAATTTCCCACCATGGAAACGCACCAACACACGTCAATGGCGTCTCCTTGACCTCATTTCCATTGCCTTCTTCTCCttactctttcttttcttcGTCCTTTTTTACACCACCCTCGGCGGTCGTCGAGTAGTCGGTCCATCCACCGTCGACCCGCAACAGCGCATTCGCCTTGTGGTGGAGATTGAGGAGGGGTTGCCAAATGGGCGGACTATTGAGGCTTGTCCTGCCAGTGAGGTGGACCATATGCCTTGTGAGGATCCGAGGAGGAATAGTCAGCTTAGTAGGGAGATGAACTACTATAGGGAGAGGCATTGTCCTCCCCCGGAGGAGACTGCCCTCTGTTTGATTCCTCCGCCTAATGGGTACCGGGTTCCGGTTCGGTGGCCTGAAAGCATGCATAAGatATGGCATAGCAACATGCCACACAACAAGATTGCTGACAGGAAAGGTCACCAGGGATGGATGAAACGAGAAGGTCAGCACTTTTTATTTCCCGGTGGTGGTACAATGTTTCCAGATGGAGCAGAGCAATATATTGAAAAACTTGGTCAATACATTCCCATAAATGGAGGTGTTCTGAGGACTGCACTTGACATGGGATGTGGGGTTGCTAGTTTTGGAGGATATTTACTAGCTCAAAATATTTTAACCATGTCTTTTGCTCCAAGAGATTCACATAAATCACAGATACAATTTGCTCTGGAAAGAGGAATACCAGCTTTTGTTGCTATGCTTGGAACTCGAAGACTCCCATTTCCTGCATTTGGATTTGACTTAGTTCATTGTTCTCGGTGTTTGATCCCGTTTACAGCCTACAATGCAACTTATTTCATTGAAGTGGATAGATTACTTCGTCCTGGTGGATATCTAGTAATCTCCGGTCCTCCTGTTCGGTGGCCTAAACAGGAAAAAGAATGGTCAGATCTCCAGGCTGTGGCAAAAGCCTTGTGTTATGAACAGATAACTGTAGATGGTAACACTGCAATCTGGAAGAAGCCAACCACAGTTTCGTGTCTTCCTAACGAAAACGGATTTGGTCTCGAGTTATGCGATGATTCTGGTGACGTCAGCCAGGCTTGGTACttcaaattgaagaaatgtgTAAGTAGTACGTCGTCTATCAAAGGAGATTATGCTGTTGGAACAATTCCGAAGTGGCCAGAGAGGCTAACTGCTGCACCTTCGAGGTCCACTCTCCTGAAAACCGGTGCTGGTGAATACGAGGTTGACACTAAGCTGTGGGCAAGGAGGGTAGCGCACTATAAGAATTCACTAAACATAAAGTTGGGGACTCCATCGATACGCAATGTCATGGACATGAATGCCTTGTATGGGGGTTTTGCAGCCGCCTTAAAATCCGATCCTGTGTGGGTAATGAACGTAGTTCCAGCTCAAAAGCCACCAACTCTTGATGCCATCTTTGACAGAGGTCTTATTGGGGTCTATCATGATTGGTGTGAACCTTTTTCAACGTACCCTCGAACTTATGATCTGATCCACGCGTCCAGCATTGAGTCATTTATAAAGGATCCAGCTTCTGGTAAAAGCAGATGTAATATTGTTGATTTGATGGTGGAAATTGATCGAATACTGCGGCCGGAGGGAACTGTTGTGGTAAGGGACACTCCTGAAGTAATCGACAAAGTAGCTCGCATTGCTCATGCTGTGAGGTGGAAGCCGACCATTTATGATAAAGAACCCGACTCACACGGCAGAGAAAAAATTCTAGTTTTGACTAAGACCTTCTGGAAGCTCTAA 1770 0.4576 MGHPNFPPWKRTNTRQWRLLDLISIAFFSLLFLFFVLFYTTLGGRRVVGPSTVDPQQRIRLVVEIEEGLPNGRTIEACPASEVDHMPCEDPRRNSQLSREMNYYRERHCPPPEETALCLIPPPNGYRVPVRWPESMHKIWHSNMPHNKIADRKGHQGWMKREGQHFLFPGGGTMFPDGAEQYIEKLGQYIPINGGVLRTALDMGCGVASFGGYLLAQNILTMSFAPRDSHKSQIQFALERGIPAFVAMLGTRRLPFPAFGFDLVHCSRCLIPFTAYNATYFIEVDRLLRPGGYLVISGPPVRWPKQEKEWSDLQAVAKALCYEQITVDGNTAIWKKPTTVSCLPNENGFGLELCDDSGDVSQAWYFKLKKCVSSTSSIKGDYAVGTIPKWPERLTAAPSRSTLLKTGAGEYEVDTKLWARRVAHYKNSLNIKLGTPSIRNVMDMNALYGGFAAALKSDPVWVMNVVPAQKPPTLDAIFDRGLIGVYHDWCEPFSTYPRTYDLIHASSIESFIKDPASGKSRCNIVDLMVEIDRILRPEGTVVVRDTPEVIDKVARIAHAVRWKPTIYDKEPDSHGREKILVLTKTFWKL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01704 589 Gene3D Vaccinia Virus protein VP39 173 334 IPR029063 -
Tsu04g01704 589 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 12 588 IPR004159 GO:0008168
Tsu04g01704 589 PANTHER PMT16, PUTATIVE-RELATED 12 588 - -
Tsu04g01704 589 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 106 329 IPR029063 -
Tsu04g01704 589 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 84 584 IPR004159 GO:0008168
Tsu04g01704 589 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 429 563 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01704 Tsu-Chr4 18101462 18106745 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01704 K23872 - gmx:100788069 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01704 04 18101462 18106745 Tsu04g01704 04 18101462 18106745 ECH
Tsu04g01704 04 18101462 18106745 Tsu08g01170 08 12925766 12932521 PCT