Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01466 ATGAAAAAGAAGTGCACAGTGGCTACCATGGAACATACCGCAGCGAAACCTAGCTCTATCCGGAACCTTCTAATACGGTTACTTCTCTCCGGCGTTTTCATCATCGCTATTCGTTTCGCTTACGTCATCTCCATCGCCGGTGAGTCATGTAACGTCTCCGATTTCTGCTTCTTCTCGCTTCCGGAGACATTCAGTCTCTCCATTGACACTGATTCCGGCGCCGGAAGTCGAAATTCATCGTTATCGGAGCTTTATTCTAGCAAAGAGTGGCTTGACAGTGTAAATTTCTACTCGTCGGTTTTTCATGATTTGATCGGCGGCGGTTACCTTTCGCCGGAGTCAAAGTCTCTCTGTGTTGAAACACCGACCGGCCGTGATGTTTTTGCTTTGAGGGAAATCGGCGTAAAAAATGCCGTCGGAATCTCGAAGAAATCAGTGAAGCCGCTTGTGAAATCAGGAACCGGTGAGAGGATTCCGTTCGGAGAcggttactttgattttgtattttccGGTGAAGGCTCATTCGCGAGGTCGGCGAAGCCGGCTGTTTTTGCGGCGGAGATTGCTCGGACGCTGAAACCAGAAGGATTTGCGGTATTTCATTTCACAAACCCTAAAGATACTTATAGTTTCAATTCATTCCTTGATTTGTTTCATTGTTTCAAAGTAGTGAAATTGCATGTTTTAGAAGGGTTTGATTCTTCAATGCCTTATATACATGAAACTGTATTGAAAAATGAGTGTGTTGATTATGGTGCTGGTAAATTGGATAGCGATTATTATTCACATTCAAATGGAAATTGTTATGTTCCTGGATATAAGAAAGATTTGATTAGGATTGCTGAGCCTTTGATTGAAAAGGAACCATTGAAACCATGGATTACATTGAAAAGGAATATAATGAATATAAAGTATCTTTCTTCAATGGTTGATATAAGTTTCAAAAATAGGTATTTGTATGTTGATGTTGGAGCTAGAAGCTATGGTTCTAGTATAGGATCTTGGTTTAGGAAACAGTATCCTAAACAGAACAAGACATTTCATGTGTATGCAATTGAAGCTGATAAGACTTTTCATAAGGAGTATGGGATGAAGAAAGGGCTTACTTTGATTCCTTATGCTGCTTGGGTGAAGAATGAGACTTTAGCTTTCGAGATTCATCGTGATCCGGGGGAGCATGTTGAGGTTAAGGGAAGAGGGATGGGTAGGATTCAGCCTTTGCAGACGACAGGGAAGGAGTTTGTTGGGGAGGTGGAGAAGATACAGGGATTTGATTTTGCTAATTGGTTGAAGAACACGGTTTCGAAGAATGATTTTGTTGTGATGAAAATGGATGTGGAGGGTACTGAATTTGATCTCATTCCAAGGTTGTTTGAAACTGGGGCAATCTGTTTGATAGATGAGATTTTCCTTGAATGCCATTACAATAGGTGGCAGAGATGTTGTCCTGGGCAGAGGAGTTCAAAGTATGAGAAAACATATGATCAATGCTTAGAGCTCTTCAATTCTCTTAGACAAAGTGGAATTCTTGTTCATCAATGGTTTTAA 1548 0.4057 MKKKCTVATMEHTAAKPSSIRNLLIRLLLSGVFIIAIRFAYVISIAGESCNVSDFCFFSLPETFSLSIDTDSGAGSRNSSLSELYSSKEWLDSVNFYSSVFHDLIGGGYLSPESKSLCVETPTGRDVFALREIGVKNAVGISKKSVKPLVKSGTGERIPFGDGYFDFVFSGEGSFARSAKPAVFAAEIARTLKPEGFAVFHFTNPKDTYSFNSFLDLFHCFKVVKLHVLEGFDSSMPYIHETVLKNECVDYGAGKLDSDYYSHSNGNCYVPGYKKDLIRIAEPLIEKEPLKPWITLKRNIMNIKYLSSMVDISFKNRYLYVDVGARSYGSSIGSWFRKQYPKQNKTFHVYAIEADKTFHKEYGMKKGLTLIPYAAWVKNETLAFEIHRDPGEHVEVKGRGMGRIQPLQTTGKEFVGEVEKIQGFDFANWLKNTVSKNDFVVMKMDVEGTEFDLIPRLFETGAICLIDEIFLECHYNRWQRCCPGQRSSKYEKTYDQCLELFNSLRQSGILVHQWF 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01466 515 Coils Coil 515 515 - -
Tsu04g01466 515 PANTHER METHYLTRANSFERASE 43 515 - -
Tsu04g01466 515 Gene3D Vaccinia Virus protein VP39 303 482 IPR029063 -
Tsu04g01466 515 PANTHER METHYLTRANSFERASE DOMAIN PROTEIN 43 515 - -
Tsu04g01466 515 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 152 229 IPR029063 -
Tsu04g01466 515 Pfam Methyltransferase domain 151 200 IPR013216 GO:0008168
Tsu04g01466 515 Pfam Methyltransferase FkbM domain 322 481 IPR006342 -
Tsu04g01466 515 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 305 473 IPR029063 -
Tsu04g01466 515 Gene3D Vaccinia Virus protein VP39 132 234 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01466 Tsu-Chr4 15156302 15158542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01466 - - gmx:102670512 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01466 04 15156302 15158542 Tsu04g01466 04 15156302 15158542 ECH
Tsu04g01466 04 15156302 15158542 Tsu06g00315 06 2562850 2565115 PCT