Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01365 ATGTCCACCAAAAATGAAACAACAACAGCCCTAATCTCTTGGCAAAAAATCCCCAACATCAAATGCGACGTCGTTTCTCCCAATTCCCACTCCCCTCTCCGTCAAAACGCTACTCTCACCTTCGCCACCACAACCACCTCCGACACCAAATTCGCATGTGTTTCTGTTGCAGAAGCCAAAATTCATAACCATTTTGCTCCGACTCCTTCTCAGCTTCTCAAACACCCACTCGCCGCCTTAGCGTTTGTTCCTAGAGATGTCGCTCTCTTCTCTGCCGGAGCCTTCGCTGGCGCCGCCGCTAAGACTTTCACTGCGCCGCTCGACCGTATCAAGCTCCTCATGCAGACTCATGGTGTGCGGGTCGGGCAAGATAGTGCTAAGAAAGCAATAGGTTTCGTTGAGGCCATAGCTGTTATAGGGAAGAAAGAAGGGATTAGAGGTTACTGGAAGGGGAACCTCCCACAGGTGATTCGGGTTATACCTTATAGTGCTGTCCAGCTTTTTGCTTACGAATTTTATAAGAAAATATTCAAGGGACAGGATGGTGAACTCTCTGTTGTGGCAAGACTTTCAGCAGGTGCTTTTGCTGGCATGACATCCACTTTTATAACTTACCCACTAGATGTTCTGAGATTACGATTAGCTGTTGAACCTGGTTGTCGAACCATGTCAGAGGTTGCCTTGTGCATGCTAAGGGAGGAAGGGTTTGCATCTTTCTATAGAGGCCTTGGGCCTTCTCTTATTGCAATTGCTCCTTATATTGCGgtgaatttttgtgtttttgactTGTTAAAGAAGTCTTTGCCCGAGAAGTATCAAAAGAGAACTGAAACAACTATACTCACTGCTGTGCTTTCGGCATCTCTAGCCACACTTACATGCTATCCTCTGGACACTGTCCGACGACAAATGCAATTGAGGGGTACACCTTATACAACAGTATTAGAAGCTTTTGCAGGTATTGTGGCACGAGATGGAGTTGCTGGTTTGTATCGGGGATTTGTACCCAACGCTCTGAAAACCCTACCAAACAGCAGCATCAAGCTTACCTCATATGACATTGTTAAGCGCGTAATTGCAGCTAGTGAGAAAGAATTTCAAACAATTACAGAGGAAAATCGCAACAAACAAAGTAACATCAACAAACAATGA 1152 0.4497 MSTKNETTTALISWQKIPNIKCDVVSPNSHSPLRQNATLTFATTTTSDTKFACVSVAEAKIHNHFAPTPSQLLKHPLAALAFVPRDVALFSAGAFAGAAAKTFTAPLDRIKLLMQTHGVRVGQDSAKKAIGFVEAIAVIGKKEGIRGYWKGNLPQVIRVIPYSAVQLFAYEFYKKIFKGQDGELSVVARLSAGAFAGMTSTFITYPLDVLRLRLAVEPGCRTMSEVALCMLREEGFASFYRGLGPSLIAIAPYIAVNFCVFDLLKKSLPEKYQKRTETTILTAVLSASLATLTCYPLDTVRRQMQLRGTPYTTVLEAFAGIVARDGVAGLYRGFVPNALKTLPNSSIKLTSYDIVKRVIAASEKEFQTITEENRNKQSNINKQ 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01365 383 Gene3D Mitochondrial carrier domain 87 369 IPR023395 -
Tsu04g01365 383 Pfam Mitochondrial carrier protein 183 270 IPR018108 -
Tsu04g01365 383 Pfam Mitochondrial carrier protein 89 179 IPR018108 -
Tsu04g01365 383 Pfam Mitochondrial carrier protein 279 360 IPR018108 -
Tsu04g01365 383 PANTHER SOLUTE CARRIER FAMILY 25 9 372 - -
Tsu04g01365 383 Coils Coil 359 379 - -
Tsu04g01365 383 PANTHER ADP/ATP CARRIER PROTEIN 9 372 - -
Tsu04g01365 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 274 358 IPR018108 -
Tsu04g01365 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 84 176 IPR018108 -
Tsu04g01365 383 SUPERFAMILY Mitochondrial carrier 88 354 IPR023395 -
Tsu04g01365 383 PRINTS Mitochondrial carrier protein signature 89 102 IPR002067 GO:0055085
Tsu04g01365 383 PRINTS Mitochondrial carrier protein signature 151 171 IPR002067 GO:0055085
Tsu04g01365 383 PRINTS Mitochondrial carrier protein signature 199 217 IPR002067 GO:0055085
Tsu04g01365 383 PRINTS Mitochondrial carrier protein signature 283 305 IPR002067 GO:0055085
Tsu04g01365 383 PRINTS Mitochondrial carrier protein signature 102 116 IPR002067 GO:0055085
Tsu04g01365 383 PRINTS Mitochondrial carrier protein signature 240 258 IPR002067 GO:0055085
Tsu04g01365 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 184 267 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01365 Tsu-Chr4 13869707 13874718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01365 6 376 Organic Solute Cotransporters AT3G51870 65.160 1.45e-178 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01365 K14684 - gmx:100778912 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01365 04 13869707 13874718 Tsu04g01365 04 13869707 13874718 ECH
Tsu04g01365 04 13869707 13874718 Tsu06g00398 06 3398104 3402137 PCT