Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00617 ATGAAAGGAAAGAGTCGGAGAAGTGGCGGTACAGTTCAATTGGATTACTTGATTCACATACAGGAGCTTAAGCCGTGGCCCCCGTCGCAATCTCTCAAATCCATTCGATCTGTATTGATACAATGGGAGAACGGCGAACGCTCTTCTGGGTCAACTAAACCTGTTTCCCCTTCAATTGGTGAAGGAAAAATGGAGTTTAATGAGTCATTTAGGCTTTCTGTGACATTGGTTAAGGACATGTCTGTTAAAAGTTCCGATGCTGAAGTTTTCCAAAAGAATACTTTGGAGTTCAACTTGTATGAGCCTAGAAGAGATAAGATTTCTAAGGGTCAGTTGCTTGGGACGGCCATTGTTGACTTGGCGGATTGTGGTATAATTAGAGAGACTTTAAGTATTAGTGTTCCATTGAATTGCAAGAGGAACTATAGAAACACGGATCAGCCACTTTTATTCGTTAAAATCGAGCCTGTTGAAAAGAATCGCAGTAAGTCCACATTGAAGGACAGTTTGTTGAAGGAGAATTCCAGCGGCGGTGATTCTGTATCAGCATTGATGAACGGTGAATATGCCGAGGAAGCTGAAATTGCATCTATTactgatgatgatgtttcctcTCATTCATCTGTTGCTGCAGTTATAAATTCACCCGAATCGAGTGCGTACATACCTCCTGGTCGCGAAGAGAATGGAACAGCTCGAAAAAATGGTAGGAAGGACAACGAACACCACTTGGTTTCAGAAACAAGTGTTGATAAATTGAATATGATGCAACAGGATATGCACGTGAAACCCGAGATGAGTCCAATAAATGGTCATAATTCTATGGAAAATACTCCCAGTCATGGTTTAGAGACAACCCAAAAGCAAGTTGTTTCTCCTAGTGCCGATTATTCTTCCATATCCTTGGAGGAAAAGTCTATGAGCAGCTCCAGAAGCAGTGATCAAGAAAATTTAGATCAGGAGATTCATGTAAAAGCTGCAAATTATATAAACGTAGTAACAAATGTTCCAACAAACAATAATGAAGGTTCTTATTCAAGCAATACTGCTTCTCTAGATAGTAATGGCTTCATGAACAAGAATCCAGGCTCAGTAAACTTTGATGGTTTGGAAATCGAGGACAAATTAAACGAGCGATGTGAGGAATCCAACAAATATTGTGTGAAGGAAGGAGGAAGCGATGAATACTATAGTTCCGTTGAGGACAAGCTTGGAAAAAGTGAAAGGTCGAAGTATGTAAAGTCTGTGAGATCATCAGGAGACTTGGCTAGGAGTATTGGATCACTTGGTAGCAATTATCATGCTGAGGTAAAGGAAAACGGCATTAATGGAGATGCTCAAAACAATGGAGGGAACATCAGAAGCAGTGAAAGAAAAGACAGTAAGATTTATCCAAAGGACGCCAGAAATAGCATTCCAGGCAGCAAGGTTGAGCAGTTGGAAAACAAGATAAAGATGCTCGAAGGAGAATTAAGAGAAGCAGCTTCAGTTGAGGCTGCTTTATATTCCGTAGCTGCTGAGCACGGAAGCTCCATGAGTAAGGTTCATGCCCCAGCTCGACGACTTTCCAGGCTTTACCTTCATGCTTGTAAAGAAAATATTCCTGCAAGAAGGTCTGGTGCAGCTAAAAGTGCTGTTTCAGGATTAGTACTTGTTGCAAAGGCATGTGGAAATGATGTACCAAGGTTGACGTTTTGGTTGTCAAATTCTATTGTTTTGAGAACAATTATAAGTCAAACAAGAAAGGATGCGGCAACGTCAAATCCTTCCGGAACTGGTGCAAGAAGGAAGAGTGGAGAAGGGAATGGCAAGATAGTACAACCATTAGTATGGAAGGGGTTCTCTCCTAAGAAAACCGAAAATATTGCAGTGGAATATGGAGGTCTTGTTAACTGGGATGACTCAAACGTGTTCACTTCGGCACTGGAAAAGGTTGAAACTTGGATCTTCTCTCGCATTGTTGAATCTATATGGTGGCAGTCTCTGACTCCACATATGCAGCTTGTTGATGCAAAGATTACTCATAAGGATGTTGGTTCTGCCTCAAGTAAAAGCTTTACGAAGACATTGAGCTCATCAAGCTCACATGATCAAGATATGGGAAATTTATCACTAGATATTTGGAAGAAGGCTTTTAGAGAAGCTTGTGAAAGAATCTGTCCAGTCCGAGCTGGGGGGCATGAGTGTGGCTGTCTGTCTGTGCTGCCTAGATTGGTTAGTTCACCAAGTTCCTTTGTCGATTTTTTTACTATGCTGAAAGGTACCTAa 2268 0.4096 MKGKSRRSGGTVQLDYLIHIQELKPWPPSQSLKSIRSVLIQWENGERSSGSTKPVSPSIGEGKMEFNESFRLSVTLVKDMSVKSSDAEVFQKNTLEFNLYEPRRDKISKGQLLGTAIVDLADCGIIRETLSISVPLNCKRNYRNTDQPLLFVKIEPVEKNRSKSTLKDSLLKENSSGGDSVSALMNGEYAEEAEIASITDDDVSSHSSVAAVINSPESSAYIPPGREENGTARKNGRKDNEHHLVSETSVDKLNMMQQDMHVKPEMSPINGHNSMENTPSHGLETTQKQVVSPSADYSSISLEEKSMSSSRSSDQENLDQEIHVKAANYINVVTNVPTNNNEGSYSSNTASLDSNGFMNKNPGSVNFDGLEIEDKLNERCEESNKYCVKEGGSDEYYSSVEDKLGKSERSKYVKSVRSSGDLARSIGSLGSNYHAEVKENGINGDAQNNGGNIRSSERKDSKIYPKDARNSIPGSKVEQLENKIKMLEGELREAASVEAALYSVAAEHGSSMSKVHAPARRLSRLYLHACKENIPARRSGAAKSAVSGLVLVAKACGNDVPRLTFWLSNSIVLRTIISQTRKDAATSNPSGTGARRKSGEGNGKIVQPLVWKGFSPKKTENIAVEYGGLVNWDDSNVFTSALEKVETWIFSRIVESIWWQSLTPHMQLVDAKITHKDVGSASSKSFTKTLSSSSSHDQDMGNLSLDIWKKAFREACERICPVRAGGHECGCLSVLPRLVSSPSSFVDFFTMLKGT 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00617 755 MobiDBLite consensus disorder prediction 270 315 - -
Tsu04g00617 755 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 14 122 IPR019448 -
Tsu04g00617 755 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 2 739 - -
Tsu04g00617 755 MobiDBLite consensus disorder prediction 230 248 - -
Tsu04g00617 755 MobiDBLite consensus disorder prediction 163 182 - -
Tsu04g00617 755 MobiDBLite consensus disorder prediction 214 250 - -
Tsu04g00617 755 MobiDBLite consensus disorder prediction 440 474 - -
Tsu04g00617 755 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 2 739 IPR021827 GO:0005643
Tsu04g00617 755 MobiDBLite consensus disorder prediction 583 602 - -
Tsu04g00617 755 ProSiteProfiles C2 NT-type domain profile. 4 158 IPR019448 -
Tsu04g00617 755 Coils Coil 477 497 - -
Tsu04g00617 755 MobiDBLite consensus disorder prediction 264 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00617 Tsu-Chr4 5736952 5740850 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00617 - - cam:101491530 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g00617 04 5736952 5740850 Tsu03g03030 03 41599008 41605404 PCT