Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00605 ATGGTTCTTCTAGGCTTAATGAAGTTCTCTGTTTTGTCACTCTGTTTCTTAGTTTTAacaacttttccttttcaaGTTTCAAGCCATGGCTCCTTTGGAAAAAAACCAAATGGTGCTTACCCATCTTTGGCTGATGGGATATGTGCTACTTCTGTCATTGTTCATGGATACAAATGTCAAGAACTTCAGGTTACAACTAAAGATGGGTACATTCTAAGCTTGCAAAGGATCCCAGAAGGTAGAGGTGAAGGTAGTAACGGTGGGACTAGGAAACAACCGGTGATATTACAACATGGAGTATTAGTGGATGGTATGACATGGCTTATGAACTCTCCAGAACAAGACTTGCCTCTAATTCTAGCAGATAATGGCTTTGATGTTTGGATTGCTAACACAAGAGGAACCAGACATAGTCGCCGACATGTCTCATTGGACCCCTCTAACCGGGCCTTTTGGAATTGGTCTTGGGACGAACTTGTTACATATGATCTACCTGCTGTGTTTGATTATGTGTACAGCCAAACAGGGCAGAAGATTAATTACGTTGGTCATTCTCTGGGTACTTTGATAGCATTAGCTTCCTTCTCAGAAAGAAAATTGGTTAATCAGCTTAAATCAGCGGCCTTATTGAGCCCCATTGCCTATCTGAGTCACATGAACACCGCACTTGGTGTTATTGCAGCCAAGTCCTTTATTGGCGAGATCACTACACTACTTGGTCTAGCTGAATTTAATCCCAAAAGTTTACCTGTGGAAGCTTTTCTCAAGCCTCTATGTGCTGACCCTGGAGTTGACTGCTTCGACTTGTTGACTGAATTAACTGGTAAAAATTGTTGTCTCAATTCTTCAACTATTGATCGATTCTTAATGAATGAACCTCAATCAACATCAACAAAGAATATGGTGCACTTGGCTCAAATTGTTAGACATGGAGTTTTAgcaaaattcaattatataagaCCAGATTTTAACATTATGCACTATGGAGAAATATTTCCACCAATATATAACCTATCAAATATTCCACATGATCTACCTCTCTTCATTAGCTATGGAGGAAAAGATGCACTTTCTGATGTTCGTGATGTTCAGAATTTACTTGATAGGCTTAAATTCCATGATGTGGATAAGAGAAGTATTCAATTTGTGAAAGACTATGCTCATGCTGATTATATTATGGGGTTTAATGCTAAGGACATAGTTTATAATTctgttatttcatttttcaatggTCAAGTCAACAATTGA 1248 0.371 MVLLGLMKFSVLSLCFLVLTTFPFQVSSHGSFGKKPNGAYPSLADGICATSVIVHGYKCQELQVTTKDGYILSLQRIPEGRGEGSNGGTRKQPVILQHGVLVDGMTWLMNSPEQDLPLILADNGFDVWIANTRGTRHSRRHVSLDPSNRAFWNWSWDELVTYDLPAVFDYVYSQTGQKINYVGHSLGTLIALASFSERKLVNQLKSAALLSPIAYLSHMNTALGVIAAKSFIGEITTLLGLAEFNPKSLPVEAFLKPLCADPGVDCFDLLTELTGKNCCLNSSTIDRFLMNEPQSTSTKNMVHLAQIVRHGVLAKFNYIRPDFNIMHYGEIFPPIYNLSNIPHDLPLFISYGGKDALSDVRDVQNLLDRLKFHDVDKRSIQFVKDYAHADYIMGFNAKDIVYNSVISFFNGQVNN 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00605 415 Gene3D alpha/beta hydrolase 45 411 IPR029058 -
Tsu04g00605 415 PANTHER LYSOSOMAL ACID LIPASE-RELATED 13 411 - -
Tsu04g00605 415 PIRSF Steryl_ester_lip 5 414 IPR025483 GO:0016788
Tsu04g00605 415 Pfam Partial alpha/beta-hydrolase lipase region 53 110 IPR006693 GO:0006629
Tsu04g00605 415 Pfam alpha/beta hydrolase fold 113 229 IPR000073 -
Tsu04g00605 415 PANTHER TRIACYLGLYCEROL LIPASE 2 13 411 - -
Tsu04g00605 415 SUPERFAMILY alpha/beta-Hydrolases 55 410 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00605 Tsu-Chr4 5642051 5647454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00605 19 415 Acyl Lipid Metabolism Gene Families AT2G15230 38.500 3.05e-95 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00605 K01052 - gmx:100779460 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g00605 04 5642051 5647454 Tsu03g03014 03 41337987 41356386 PCT