Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03014 ATGTCAGCAATAATGGTGAAAGAGTTGGAATTGATTGAAGAGTTTCGAGATTTGAGTCTAGTTTGTGAAGTTACTTCAAAAAGCGTGAAGTTGAGAATATTGAAGTTGACGAGTCCTTTTCTGGAAGATATCAAAGAATGTCAAAAGACCGATAAGAAATTGATGGAGAAGTTGGcacttgttgttgaagaagggAAAGAAGTTAATTTCAAAGTTGATGAAGAGGGAATGATAAGATTTCGCGGAAGAGTGTGTGTACCCGATGTACCGGAGTTAAAGAAGATGATCATGGATGAAGGTCATAGAAgcggattaagtattcatccggGAGTAACAAAGATGTACCAAGacttgaagaaattattttggtGGCCGGGAATGAAGAGGCAGATCTCTGATGGGATAGCATCGCTATGGACTTTGTGGGAGGGGAGGTTAGTGCCAAAGTTAGCCGAAATTTATGTGGACCAAATTGTGAGGCTACATGGTATTCCGTCGAGTATTGTTTCGGATCGAGATCCAAGATTTACTTcgagattttgggaaagcttgcaagagGCTTTGGGAACTAAGTTGCGACTGAGTTCGGCCTATCATCCTCAGACAGATGGTCAGTCGGAAAGGACAATTCAATcattggaagatttgttgagagcttGCGTTTTAGACCGAGGTTTGGATTGGGATTCATGTTTGTCGTTGATAGAGTTTACTTACAACAACAGTTTCCATTCGAGTATCAGAATGGCACcgtttgaagctttgtatgggaggagGTGTAGGACACCGCTTTGTTGGTATGAGTCAGGAGAGAATGTGGTACTTGGACCGGAGATTGTACATGAAACTAccgagaagattagaatgattcggGAGAAGATGAAGGCATCTCAAAGTCgtcagaaaagttaccatgacaaGAGGAGAAAGGATATTgaattccaagagggagatcaCGTTTTCTTGAGAGTTACTTCAACTACCGGAGTGGGAAGAGCTTTAAAGTCAAGGAAATTAACATCGAAGTTTATTGGACCATTTCAAATTTCAGAAAGAGTGGGAAAATTGGCGTATAGGATTGCCTTGCCGCCATCATTAGCAAATTTGCACGATGTTTTTCATGTATCTCAATTGAGGAAGTATGTGAAGGATCCGTCGCATGTGATTCAGTCGGATGATATTCAAGTAAGAGATGATCTAACCGTAGAGACGATTCCTTTGAGAATAGAGGGAAGAGAAACGAAGAAGTtgaggaataaagagattgtTTCAGTGAAAGTAATTTGGGGAGGACCCGCGGGCGAGAATGCGACATGGGAATTGGAGAgtaagatgaagagttcgtacCCGGAGTTATTTTCAgtgTCCGGCTTTCCTCGTAAAGTGTATGAGGATGAAGACGGGAATCCTCTTCTTGACATAGAAACCGAAGGGAATCATGCTGAGATCGTGGACCTGGACAATGTTGGGGAGCGTATCAAGGATGAGACACACCCGTCCAAAGTTGCTCAGGTCGATGAGACGGACGCTTCGACCAGTGGGCGCGTTCCTTCTGTGGTGCCCAGATTCGTCATTCCTCCGGTAATGGGGAGTCAAGAGCTCCTCAAGCAAAAATCTGTGATCGTTGTTTCTGATGCTGAAAAGACGGTCATGGACGACATGGGCCCCGATGCTCTAAAGAACGAGTTCATTGATGCCATGGTGTCTGCCTTCAAGTTGATGGAGATAGCGAGCTATCTTAATGGGAAGGAGTGCAAGTACCTGGAGGAACGGGATGCGGCGAAGGAGGAAGCAGTCTTTTTCAAGCAAAAGCTGGAGCATGCCAAAGTTAACCATGCTGCTTACATGGAGAAGTACGTGCTCCAAGCTGGATTGCTGATTAAGCTTTATGAGAAGGAGAAGGAGGCTGCTCGGTTGACTATTGAAAAGGGGGGGTTAGAGGGACAGCTTGCGAGCTTGGTTGCTGAGAAGGAAAACTCTCGAGGACAAGCAACTCATAATCATCAAGCTCAGGCTTCGACTTGTCCTATTGTTAGTACGGAAAATATTCAATCTTCTTCAAACGGTTTATGTGCTTCTTCTGTCGCTATCCATGGCTACAAATGCCAAGAATATGAAGTTACAACTGGAGATGGATATATTCTCAGCGTTCAAAGGATTCCAGAAGGTCGATCTAAAGTTAGTGGCAATGTGACTAAGAAGGAACCAGTGGTTGTACAACATGGAGTTTTAGTGGATGGATCAAAATGGTTTTTGAACAGTCCAGAGCAAAACCTGCCTATGATTCTTGCTGATAATGGCTTTGATGTGTGGATTGTTAATGCCAGAGGAACCAAATTTAGCCGCAAACACACTTCCCTAGATGCATCTAGCGCGCAATATTGGGCTTGGTCTTGGGATGAATTGGTTACTGATGAAATGCCAGCTATTTTTGATTTTGTCTCAAAAAATTCAGGGGGACAGAAGATAAATTATGTTGGGCATTCTTTGGGGACTTTGGTAGCTTTGGCATCATTGGCAGAAGGTAAATGGACAACTGATCATGTGAAGTCAGTAGCATTGTTGAGTCCTATTGCCTATTTGAGTAGAATGACAACTCCAATAGGAGCTGTTGCTGCAAGATCCTTACTCGCCGAGggctATACTTTTCTGGGCATTCCTGAATTTGATCTCAAAGCGTATCCTATTCTTGATTTCTTTAAGGGTGTTTGTGCTCAAAATGGAGTAAACTGTGATGACTTGTTTACTGCAGCAAcagGTGAAAATTGTTGCTTACAACAATCAGTTTTTAATCAATTCATGGCGGTTGAACCACAACCGTCATCAACAAGGAACATGTTTCATTTAGCTCAGACCGTTCGAAGTGATCACTTGACGAAATTTGACTTTATGAGACCAGACTTGAACATGTTGCATTATGGACGACTATTTCCTCCGGCCTACGACCTCACAAAAATCCCTAACGACATGCCAATTTTCATGAGCTATGGTGGTAAAGACGCACTTTCTGATGTCGCCGATGTTAAAAAATTACTCGGATATTTTGAGAACCATGACCCACAAAAGCTTATTGTTCAGTTCATTGATAACTATGCTCATGCTGATTACGTAATGGCTTATAATGCCAAAGACTTAGTGTACAATAATGTTACATCATTTTTAAAGCGTCAATGGTGA 3177 0.3935 MSAIMVKELELIEEFRDLSLVCEVTSKSVKLRILKLTSPFLEDIKECQKTDKKLMEKLALVVEEGKEVNFKVDEEGMIRFRGRVCVPDVPELKKMIMDEGHRSGLSIHPGVTKMYQDLKKLFWWPGMKRQISDGIASLWTLWEGRLVPKLAEIYVDQIVRLHGIPSSIVSDRDPRFTSRFWESLQEALGTKLRLSSAYHPQTDGQSERTIQSLEDLLRACVLDRGLDWDSCLSLIEFTYNNSFHSSIRMAPFEALYGRRCRTPLCWYESGENVVLGPEIVHETTEKIRMIREKMKASQSRQKSYHDKRRKDIEFQEGDHVFLRVTSTTGVGRALKSRKLTSKFIGPFQISERVGKLAYRIALPPSLANLHDVFHVSQLRKYVKDPSHVIQSDDIQVRDDLTVETIPLRIEGRETKKLRNKEIVSVKVIWGGPAGENATWELESKMKSSYPELFSVSGFPRKVYEDEDGNPLLDIETEGNHAEIVDLDNVGERIKDETHPSKVAQVDETDASTSGRVPSVVPRFVIPPVMGSQELLKQKSVIVVSDAEKTVMDDMGPDALKNEFIDAMVSAFKLMEIASYLNGKECKYLEERDAAKEEAVFFKQKLEHAKVNHAAYMEKYVLQAGLLIKLYEKEKEAARLTIEKGGLEGQLASLVAEKENSRGQATHNHQAQASTCPIVSTENIQSSSNGLCASSVAIHGYKCQEYEVTTGDGYILSVQRIPEGRSKVSGNVTKKEPVVVQHGVLVDGSKWFLNSPEQNLPMILADNGFDVWIVNARGTKFSRKHTSLDASSAQYWAWSWDELVTDEMPAIFDFVSKNSGGQKINYVGHSLGTLVALASLAEGKWTTDHVKSVALLSPIAYLSRMTTPIGAVAARSLLAEGYTFLGIPEFDLKAYPILDFFKGVCAQNGVNCDDLFTAATGENCCLQQSVFNQFMAVEPQPSSTRNMFHLAQTVRSDHLTKFDFMRPDLNMLHYGRLFPPAYDLTKIPNDMPIFMSYGGKDALSDVADVKKLLGYFENHDPQKLIVQFIDNYAHADYVMAYNAKDLVYNNVTSFLKRQW 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03014 1058 Gene3D - 146 302 IPR036397 GO:0003676
Tsu03g03014 1058 ProSiteProfiles Integrase catalytic domain profile. 150 259 IPR001584 GO:0015074
Tsu03g03014 1058 Gene3D - 50 137 - -
Tsu03g03014 1058 Gene3D alpha/beta hydrolase 679 1056 IPR029058 -
Tsu03g03014 1058 PANTHER TRIACYLGLYCEROL LIPASE 2 668 1057 - -
Tsu03g03014 1058 Pfam Partial alpha/beta-hydrolase lipase region 696 753 IPR006693 GO:0006629
Tsu03g03014 1058 SUPERFAMILY Ribonuclease H-like 154 255 IPR012337 -
Tsu03g03014 1058 SUPERFAMILY alpha/beta-Hydrolases 696 1055 IPR029058 -
Tsu03g03014 1058 Pfam Integrase zinc binding domain 91 133 IPR041588 -
Tsu03g03014 1058 Coils Coil 591 611 - -
Tsu03g03014 1058 PANTHER LYSOSOMAL ACID LIPASE-RELATED 668 1057 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03014 Tsu-Chr3 41337987 41356386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03014 685 1057 Acyl Lipid Metabolism Gene Families AT2G15230 33.780 5.77e-73 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03014 - K01052 cam:101508115 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g00605 04 5642051 5647454 Tsu03g03014 03 41337987 41356386 PCT