Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02751 ATGAAATTCGGAAAGAGTTTGAACAATCAGATCGAGAAAACTGTTCCCCAATGGCGTGACAAATTTCTTTCTTacaaagaattgaagaagaaattaaagCTTGTTGAACCAATCAGCAGTAGCATCAGCAATGAACGCCCTTCAAAAAAAGCTAGGATCGATGGAAATAATATTTCCAATGAAGAAACCGATTTTAGAAACTCTCTTGAAAATGAACTCAATAAattcaacactttctttcttGAGAAAGAGGAAGAGTGCATTATAAGACTCAAGGAGTTACAAGATTGTGTGGCAAAAGGAAAGGGTTCGAATGAACAAATGATGCAAATTCAAAAGGATATTGTAGATTTCCATGGAGAGATGGTCTTGCTCCAAAACTATAGCTCCCTTAACTACACAgGACTAGTAAAAATACTAAAGAAGTATGACAAGAGAACCGGAGCTCTCATTCGCTTGCCTTTCATTCAGAAGGTATTGCAAGAACCATTCTTTGCCACTGACTTGCTCTACAAGCTTATAAAGGAGTGTGAAACAATGTTGGAAGGTCTTTTCCCGGCCAACGATCCTCAGGCTTTTGGTGAGACAGATGAACTGTGCAACGGTCCTTCTACTTCCACAAGTACAACGAGCGATGATCTTGTCATACCAAATGAGATAGCAGAAATGCAAAGCCTCTATATGAAGAGTACCATATCGGCTTTGCATGTTCTGCAGGAAATCAGAAGCGGAAGCTCCACTGTTAGCATGTTTTCTTTGCCACCATTGGAAGAAACATGGAACAAAATTTCTGTTTTGGAACAAACAGCTAAGTAA 816 0.3738 MKFGKSLNNQIEKTVPQWRDKFLSYKELKKKLKLVEPISSSISNERPSKKARIDGNNISNEETDFRNSLENELNKFNTFFLEKEEECIIRLKELQDCVAKGKGSNEQMMQIQKDIVDFHGEMVLLQNYSSLNYTGLVKILKKYDKRTGALIRLPFIQKVLQEPFFATDLLYKLIKECETMLEGLFPANDPQAFGETDELCNGPSTSTSTTSDDLVIPNEIAEMQSLYMKSTISALHVLQEIRSGSSTVSMFSLPPLEETWNKISVLEQTAK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02751 271 CDD SPX_AtSPX1_like 2 146 - -
Tsu03g02751 271 ProSiteProfiles SPX domain profile. 1 157 IPR004331 -
Tsu03g02751 271 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 271 IPR031142 GO:0016036
Tsu03g02751 271 PANTHER SPX DOMAIN-CONTAINING PROTEIN 2 1 271 - -
Tsu03g02751 271 Pfam SPX domain 110 159 IPR004331 -
Tsu03g02751 271 Pfam SPX domain 1 35 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02751 Tsu-Chr3 36659788 36661876 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02751 - - gmx:100790400 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03952 04 48223186 48225787 Tsu03g02751 03 36659788 36661876 PCT