Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02283 ATGGCACCACCAAGCATAACAAAAACTACAACACCCCTAAACATAATTGGCCTCGTCGACATGACTAATCCACCCTTATCTATAACCTTAGACCAATCATGTTTTCTTGCAAATGGCCACCCTTTTCTAACTCAAGTTCCACCGAacataacaacaacaaccactTTTCTCAATTCAAAATCCAACAAAGACAAAACCTCCTTGCAACAAGGTTGTTTCGTTGGGTTCAACACCACCGAACCCAAAAGCCGCCATGTAGTTCCACTTGGCAAATTAAAAGGAATCCGGTTCATGAGCATTTTCCGGTTTAAAGTATGGTGGACAACTCATTGGACTGGAACAAACGGGCACGAACTAGAACACGAAACACAACTCTTAATCCTCGACCAAAACAATTCCCTCGGACGCCCCTATGTTTTACTCCTCCCAATCATCGAGAACTCTTTTCGAACCTCACTCCAACCCGGTTCAAACAATTACATCGACATGTGTATCGAATCTGGTTCGACACGTGTCACTAGTTCACACTTTAGAACATGTCTTTACATCCACGTCAGCAATGACCCATACCATTTGGTAAAAGAAGCGGTGAAACTAATCCAAACCCACTTAGGAACATTTAAGATTCTTGAAGAAAAAACACCGCCgaatattattgataaattCGGTTGGTGCACGTGGGATGCATTTTACTTGAAAGTGCACCCAAAAGGTGTAAGGGAAGGTGTTAAGGGTCTTACGGAGGGTGGGTGTCCTCCAGGTTTGgtattaattgatgatggttGGCAGTCCATTTGTCATGATGATGATCCAATTACTGACCAAGAAGGTATGAACCGTACCTCAGCTGGAGAACAAATGCCATGTAGgttaataaaatttgaagaaaattataaatttagagAATATCAAagtgttaataataataacaatagagtaaaaaaatttaagggtatgGGTGGTTTTGTTAGGGATTTGAAGGAAGAGTTTAGGAGTGTGGAGAGTGTTTATGTTTGGCATGCACTTTGTGGATATTGGGGTGGGGTTAGACCTAAAGTGGTTGGAATGCCCGAAGCTAAGGTTGTTACTCCGAAGCTGTCTCCGGGGCTAAAGATGACAATGGAGGATTTAGCTGTGGATAAGATTGTTAATAATGGTGTTGGTTTAGTGCCGCCAAATCTGGTTCAAGATATGTATAATGGACTTCATTCTCATTTGGAAGAGGCAGGAATTGACGGTGTTAAGGTTGATGTTATACATTTGCTTGAGTTACTATCAGAGGAATATGGTGGGCGCGTTGAACTAGCAAAATCTTATTACAAAGCATTAACCTCATCAGTGAAGAAACATTTCAAAGGCAATGGAGTAATTGCAAGCATGGAGCATTGCAACGACTTCTTTCTCCTCGGCACAGAAGCCATATCCCTCGGACGCGTAGGAGACGATTTTTGGTGCTCTGATCCCTCTGGTGATCCAAATGGTACATATTGGCTCCAAGGTTGTCACATGGTACATTGTGCCTACAATAGTTTATGGATGGGAAATTTTATTCATCCAGATTGGGACATGTTTCAATCAACTCACCCTTGTGCTGAATTTCATGCTGCCTCTAGAGCTATCTCTGGTGGACCTATTTATGTTAGTGATTGTGTTGGTAATCACAATTTCAAGTTGCTTAAAACTCTTGTTTTGCCTGATGGTTCGATCTTGCGTTGTCAACATTATGCACTCCCTACAAGAGATTGCTTGTTTGAAGATCCTTTACATGATGGCAAAACAATGCTTAAAATTTGGAATCTCAACAAATACACTGGTGTATTGGGTCTATTTAACTGCCAAGGTGGTGGGTGGTGTCCTGTGACACGGCGAAACAAGAGTGCATCTGAATTTTCACACTTGGTGACATGTTATGCAAGTCCTAAAGATATTGAATGGTGCAATGGAAAAATCCCAATGTGCATCAAAGGTGTGGATGTGTTTGCTGTGTATTTCTTCAAGGAGAAGAAACTGAAGCTGATGAAGTGTTCGGATAAATCGGAAGTATCACTCGAGCCATTTTGTTTTGAGCTAATGACAGTGTCTCCGGTGAGAGTGTTTTCGAAAAAGTTGATTCAGTTTGCTCCATTTGGGTTAGTGAACATGCTTAACTCCGGTGGCGCGGTTCAGTATATGGAGTTTAATGATCATGAAAGTTTGGTAAAAATTAGGGTGAGGGGTTGTGGTGAGATGAGTGTGTTTACATCAGAGAAACCAGTTTGCTGCAAAATTGATGGAGTGGGtgtgaaatttgattatgaggATAAAATGGTGAAAGTCCCAATTTCATGGCCTAGTTCTTCAACTCTGTCTTTGGttgagtttttattttga 2370 0.3928 MAPPSITKTTTPLNIIGLVDMTNPPLSITLDQSCFLANGHPFLTQVPPNITTTTTFLNSKSNKDKTSLQQGCFVGFNTTEPKSRHVVPLGKLKGIRFMSIFRFKVWWTTHWTGTNGHELEHETQLLILDQNNSLGRPYVLLLPIIENSFRTSLQPGSNNYIDMCIESGSTRVTSSHFRTCLYIHVSNDPYHLVKEAVKLIQTHLGTFKILEEKTPPNIIDKFGWCTWDAFYLKVHPKGVREGVKGLTEGGCPPGLVLIDDGWQSICHDDDPITDQEGMNRTSAGEQMPCRLIKFEENYKFREYQSVNNNNNRVKKFKGMGGFVRDLKEEFRSVESVYVWHALCGYWGGVRPKVVGMPEAKVVTPKLSPGLKMTMEDLAVDKIVNNGVGLVPPNLVQDMYNGLHSHLEEAGIDGVKVDVIHLLELLSEEYGGRVELAKSYYKALTSSVKKHFKGNGVIASMEHCNDFFLLGTEAISLGRVGDDFWCSDPSGDPNGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGNHNFKLLKTLVLPDGSILRCQHYALPTRDCLFEDPLHDGKTMLKIWNLNKYTGVLGLFNCQGGGWCPVTRRNKSASEFSHLVTCYASPKDIEWCNGKIPMCIKGVDVFAVYFFKEKKLKLMKCSDKSEVSLEPFCFELMTVSPVRVFSKKLIQFAPFGLVNMLNSGGAVQYMEFNDHESLVKIRVRGCGEMSVFTSEKPVCCKIDGVGVKFDYEDKMVKVPISWPSSSTLSLVEFLF 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02283 789 PANTHER - 23 789 IPR008811 -
Tsu03g02283 789 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED 23 789 - -
Tsu03g02283 789 Pfam Raffinose synthase or seed imbibition protein Sip1 31 772 IPR008811 -
Tsu03g02283 789 SUPERFAMILY (Trans)glycosidases 218 572 IPR017853 -
Tsu03g02283 789 Gene3D Aldolase class I 214 563 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02283 Tsu-Chr3 25651402 25657017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02283 1 789 Glycoside Hydrolase AT5G40390 62.233 0.0 1033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02283 K06617 - gmx:100800308 1284.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02601 04 29370713 29376340 Tsu03g02283 03 25651402 25657017 ECH
Tsu03g02283 03 25651402 25657017 Tsu03g02283 03 25651402 25657017 ECH