Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02095 ATGCAACAAAGCATTAATTGGCATCACATTGATGTTGAGTTAGCTTTCAACCTAGCACTCTATCTATCTAACTATCTATCTTGTGTTCAGtgtcTTTTACAAATAAGCATGAGTGAGGATCTGAAGAAAATTGCCTCTGATGGCCAAGAGAAAATGTCACAAGAGCAACAGATAAAGATCATTGAGGTGAGAAAGTTGATGGGAACATTATCAGATAAAGAATCTGTGTATTGTTCTGATGCATCCATTTCAAGGTATTTAAAATCACAAAATTGGAATGTTAAGAAAGCATCTCAAATGTTGAAACAAAGCCTAAAATGGAGACAGGAGTATAAACCTGAAGAGATCCGCTGGGACGAGGTTTCTAATGAAGCAGAGACAGGGAAAATATATCGACCAAATTATTGTGACAAGCATGGAAGACCAGTGCTTATAATGAGAACAAATCGCCAGAAGTCGAAGACATTAAAAGATGAGATTAAGCATTTTGTTTACTGCATGGAGAATGCAATTTTAAATCTTCCACCACACCAAGAACAGGTGATATGGCTGGTTGATTTCCATGGTTTCAATTTGTCAAATGTATCATTCAAGATGACACGTGAAGTTAGCcatatattacaaaaatattatccTCAGCGCCTCGGATTGGCAATCATGTATGATGCACCTGGGATTTTCCAACCATTCTTCGCGATGGTAAAGGTCCTGCTTGAGCAAGAGAGTTATAATAAGGTAAAGTTTGTTTATTCTAATGACCAAAACACAACGAAGATTATGGAGGGTTTGTTTGATATGGATCAACTTGAACCTGCATTTGGTGGGACTGATGACACAGAATTTGATATAAATAAGTATGCTAAGAGAATGAGAGAGGAAGATAACAAGATGCAATCTTTATGGACAAAGGCAAACCCTCTATCATTAGTCACACAGAATGTCCCTTCTGATTCGATCGAGTTGGAAACAGATTCTAATGCTTCCAACAACAAGAAATTATTAAGTTCCTCTATTCCTAACCCTGATAAATATATCTTGGTTAATCGTCAGGAAAAAAATGCCGTGGCATTAGAATGA 1077 0.3621 MQQSINWHHIDVELAFNLALYLSNYLSCVQCLLQISMSEDLKKIASDGQEKMSQEQQIKIIEVRKLMGTLSDKESVYCSDASISRYLKSQNWNVKKASQMLKQSLKWRQEYKPEEIRWDEVSNEAETGKIYRPNYCDKHGRPVLIMRTNRQKSKTLKDEIKHFVYCMENAILNLPPHQEQVIWLVDFHGFNLSNVSFKMTREVSHILQKYYPQRLGLAIMYDAPGIFQPFFAMVKVLLEQESYNKVKFVYSNDQNTTKIMEGLFDMDQLEPAFGGTDDTEFDINKYAKRMREEDNKMQSLWTKANPLSLVTQNVPSDSIELETDSNASNNKKLLSSSIPNPDKYILVNRQEKNAVALE 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02095 358 Pfam CRAL/TRIO domain 126 275 IPR001251 -
Tsu03g02095 358 Gene3D - 30 313 IPR036865 -
Tsu03g02095 358 SUPERFAMILY CRAL/TRIO domain 118 299 IPR036865 -
Tsu03g02095 358 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 118 281 IPR001251 -
Tsu03g02095 358 SMART sec14_4 124 278 IPR001251 -
Tsu03g02095 358 CDD SEC14 126 276 IPR001251 -
Tsu03g02095 358 PANTHER GH16843P 37 339 - -
Tsu03g02095 358 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 37 339 - -
Tsu03g02095 358 SUPERFAMILY CRAL/TRIO N-terminal domain 34 120 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02095 Tsu-Chr3 22120331 22123967 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02095 - - cam:105852179 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02095 03 22120331 22123967 Tsu03g02095 03 22120331 22123967 ECH
Tsu05g02537 05 34532057 34536864 Tsu03g02095 03 22120331 22123967 PCT