Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01990 ATGCGGCTCTATAATACAACCTGCTGCACACATTCTCTCTTCAGATTCATGCCTTCTTCCAAATTATTGGCCTCTTCTAATAATTTCCGCAGCGTCATTTCTCCTTCTTTCTCTAAAACTAAAACCCCCAAATTCTCGTCTTTCATTTCCGCCACCATGTCCACTGTTTCCACCGAGAAGAAGAATCACACTCAAACCCATCCTTCGCAGGTTGCAAAACGGTTAGAGAAGTTCAAAACAACGATTTTCACTCAAATGAGTATGCTTGCCATCAAACACGGAGCCATAAACCTTGGTCAGGGTTTTCCAAACTTTGATGGGCCAGATTTTGTAAAGGAAGCAGCAATTCAAGCAATCAGGGATGGGAATAATCAGTATGCCAGGGGTTATGGTGTTCCAGACCTCAACATTGCCATTGCCGAGAGGTTCAAGAAAGATACTGGACTAGTGGTAGATCCTGAAAAAGAAATTACTGTGACATCTGGGTGCACGGAAGCAATTGCTGCAACTGTGTTAGGGTTGATAAATCCTGGTGACGAGGTTATTGTGTTTGCTCCTTTTTATGATTCTTATGAAGCCACTTTATCTATGGCTGGTGCAAAAGTCAAAGGCATCACTCTGCGACCTCCAGATTTTGCTCTTCCGATTGATGAGTTGAAATCCACCATCTCGAAGAATACTCGTGCCATTCTTTTAAACACCCCTCACAATCCTACCGGAAAGATGTTCACTCGAGATGAGCTCAATACCATTGCATCTCTTTGCATTGAGAATGATGTTCTAGTTTTCTCCGATGAAGTTTATGATAAGTTGGCATTTGATATGGAACACATTTCAATTGCTTCTTTGCCTGGAATGTTTGAGCGGACAGTGACAATGAACTCATTGGGGAAGACATTCTCCTTGACTGGATGGAAAATCGGCTGGGCCATAGCACCTCCACACTTAACATGGGGAGTGCGTCAAGCACATGCTTTCCTCACTTTTGCAACCTCAAATCCTATGCAGTGGGCTGCTGCTGTAGCTCTCAGAGCTCCGGATTCTTATTATACTGAATTGAAGAGGGATTATATGGCAAAGAGAGCTATTTTGGTTGAAGGGTTGAAGGCTGTTGGCTTCAAGGTATTCCCATCTACTGGAACCTATTTTGTGGTTGTTGATCACACCCCTTTTGGACATGAGAATGATGTTGCATTCTGCGAATATCTAGTTAAGGAGGTGGGAGTGGTGGCAATTCCAACCAGTGTGTTTTACTTGAATCCAGAAGAGGGAAAGAATCTAGTCCGGTTTACTTTCTGCAAGGATGAAGGAACTCTTAGGGCTGCTGTTGAGAGGATGAAGGAGAAGCTTAGAAAATGA 1359 0.4327 MRLYNTTCCTHSLFRFMPSSKLLASSNNFRSVISPSFSKTKTPKFSSFISATMSTVSTEKKNHTQTHPSQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGNNQYARGYGVPDLNIAIAERFKKDTGLVVDPEKEITVTSGCTEAIAATVLGLINPGDEVIVFAPFYDSYEATLSMAGAKVKGITLRPPDFALPIDELKSTISKNTRAILLNTPHNPTGKMFTRDELNTIASLCIENDVLVFSDEVYDKLAFDMEHISIASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHAFLTFATSNPMQWAAAVALRAPDSYYTELKRDYMAKRAILVEGLKAVGFKVFPSTGTYFVVVDHTPFGHENDVAFCEYLVKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEGTLRAAVERMKEKLRK 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01990 452 Gene3D Aspartate Aminotransferase, domain 1 85 446 IPR015422 GO:0003824
Tsu03g01990 452 SUPERFAMILY PLP-dependent transferases 71 451 IPR015424 -
Tsu03g01990 452 CDD AAT_like 96 448 - -
Tsu03g01990 452 PANTHER FI04487P 71 452 - -
Tsu03g01990 452 PANTHER FI04487P 71 452 - -
Tsu03g01990 452 Pfam Aminotransferase class I and II 96 445 IPR004839 GO:0009058|GO:0030170
Tsu03g01990 452 Gene3D - 108 346 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01990 Tsu-Chr3 20633595 20635925 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01990 K23977 - gmx:100818968 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00781 02 6529980 6533614 Tsu03g01990 03 20633595 20635925 PCT