Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00781 ATGGCTAACACGTTATATAACAATACCACGTGTGGAATCTCTTTCCATGACCAATCTCTCTCCGCTGCTAATTCCGCTTCTCGCCACGTCTCCAGATCCCTCTCTTTCTTCTCAAACAATTCCCACAAGTCACTTGTTGGGGTGGAGCAGAATAATAATAGAAGAGGGAGATTAATTGTCAAGTCATCAAAAActgattttgatgatttggGTATTGATATTTCATTGAGTCCACGTGTCAATGCTGTCAAACCTTCAAGAACTGTCGCTATAACTGATCAAGCTACTGCTCTTGTTCAAGCTGGTGTTCCTGTTATTCGCTTGGCCGCTGGTGAGCCTGATTTTGATACTCCTGCTGTTATTGCTGAGGCTGGGATTAATGCAATTCGTGAAGGACACACAAGGTACACACCTAATGCTGGAACCTTTGAATTGCGCCAGGCTATTTGTCATAAGCTTAAAGAGGAGAATGGACTTGATTATACTCCCGATCAGGTTGTTGTTAGTAATGGAGCTAAGCAGAGTATTGCTCAGGCAGTAATCGCAGTTTGCTCTCCAGGAGATGAGGTCATTGTTCCAGCTCCATTCTGGGTTAGTTACCCAGAAATAGCAAGGTTGGCTGATGCAACACCCGTAATTCTTCCAACGTCGATATCTAATAATTTCCTTTTAGATCCCAAACTCCTTGAGTCAAAAATTACTGAAAGATCAAGAGTGCTTATTCTCTGTTCACCGTCTAACCCAACAGGATCTGTCTATCCTAAAGAATTACTTGAAAAGATAGCCGATATTGTAGCAAAGCACCCAAGGCTTCTGGTTATCTCTGACGAAATTTATGAACACATAATTTATGCACCGGCAACACACACAAGCTTTGCATCTTTACCGGGAATGTGGGACAGAACTCTAACCGTGAATGGATTTTCTAAGGCCTTTGCAATGACTGGTTGGCGGCTTGGTTATATTGCTGGCCCAAAACATTTTATTGCAGCATGTGGAAAGGTTCAAAGCCAGTTCACTTCAGGGGCTAGTAGTATATCTCAGAAAGCTGCAGTTGCTGCATTAGGACTAGGCTATGCTGGTGGGGAGACTGTTTCTGTCATGGTGAAAGCGTTTAGAGAACGAAGGGATTACTTGCTTAAAAGTTTTAGCGAAATTGACGGTGTTAAAATATCCGAACCAAAGggagcattttatttattcatcgACTTCAGCTCCTATTATGGAAGAGAAGCCGAAGGATTTGGTAAAATTGAGGATTCTGAGTCCCTCTGTCGGTATTTGTTGGATAAAGGCCAGGTAGCACTAGTGCCTGGGAGTGCATTTGGAGACGATACTTGCATCCGTATCTCTTATGCCGCATCCCTTACTACCCTACAGGCAGCTGTAGAGAGAATTAAGAAATCCCTTATATCTCTTACCTCTGCTGCACTTGTTTAG 1440 0.4194 MANTLYNNTTCGISFHDQSLSAANSASRHVSRSLSFFSNNSHKSLVGVEQNNNRRGRLIVKSSKTDFDDLGIDISLSPRVNAVKPSRTVAITDQATALVQAGVPVIRLAAGEPDFDTPAVIAEAGINAIREGHTRYTPNAGTFELRQAICHKLKEENGLDYTPDQVVVSNGAKQSIAQAVIAVCSPGDEVIVPAPFWVSYPEIARLADATPVILPTSISNNFLLDPKLLESKITERSRVLILCSPSNPTGSVYPKELLEKIADIVAKHPRLLVISDEIYEHIIYAPATHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYIAGPKHFIAACGKVQSQFTSGASSISQKAAVAALGLGYAGGETVSVMVKAFRERRDYLLKSFSEIDGVKISEPKGAFYLFIDFSSYYGREAEGFGKIEDSESLCRYLLDKGQVALVPGSAFGDDTCIRISYAASLTTLQAAVERIKKSLISLTSAALV 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00781 479 CDD AAT_like 106 468 - -
Tsu02g00781 479 Pfam Aminotransferase class I and II 104 466 IPR004839 GO:0009058|GO:0030170
Tsu02g00781 479 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 19 474 - -
Tsu02g00781 479 PANTHER GLUTAMATE-OXALOACETATE TRANSAMINASE5 19 474 - -
Tsu02g00781 479 Gene3D Aspartate Aminotransferase, domain 1 89 464 IPR015422 GO:0003824
Tsu02g00781 479 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 307 320 IPR004838 GO:0003824|GO:0009058|GO:0030170
Tsu02g00781 479 SUPERFAMILY PLP-dependent transferases 76 469 IPR015424 -
Tsu02g00781 479 Gene3D - 135 357 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00781 Tsu-Chr2 6529980 6533614 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00781 K15849 - gmx:100776446 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00781 02 6529980 6533614 Tsu02g00781 02 6529980 6533614 ECH
Tsu02g00781 02 6529980 6533614 Tsu03g01990 03 20633595 20635925 PCT