Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01913 ATGGAGTGTGTCAAAACCAATTCCAAATACTCATCCATCTTCATAACCATTTTTATTCTCTTATTATCTCCCACATTGTCGTTCGCAAATCCTAAAACTCACGAGCACGAGTTTGTCgTTGAAGCAACTCCAGTGAAGAGGCTGTGCAAAACTCACAACACCATAACCGTGAATGGGCAATTCCCTGGTCCAACTTTGGAAATTAACAATGGAGACACTTTGGTTGTCAAAGTTATTAACAAAGCTCGTTATAATGTCACCATTCATTGGCATGGTGTTAGACAAATGAGAACAGGATGGGCAGATGGTCCAGAATTTGTGACACAGTGTCCCATACGTCCTGGAGGAAGTTACACCTACCGTTTTACTGTTAATGGACAAGAAGGTACACTTTGGTGGCATGCTCATAGTTCTTGGCTAAGAGCCACTGTTTATGGTGCTTTAATCATTCGTCCTAGGCAAGGAGATTACTACCCTTTTCCTAATCCAACCCGCGACACACCCATTCTTTTAGGGGAATGGTGGGACAGAAACCCAATAGATGTTGTGAGGCAGGCCCAAAGAACAGGAGCAGCTCCAAATATATCTGATGCATACACTATCAATGGTCAACCCGGTGACTTTTACAAGTGCTCTACCAAAGGTACAACCATCATTCCAATACATTCCGGCGAGACAAACCTCATTAGAGTGATCAATGCGGCACTTAACCAACCACTTTTCTTCACAATCGCTAACCACAAACTAACCGTGGTTGGCGCTGATGCCTCTTACCTTAAACCCTTCACCACCAACATCCTCATGTTAGGACCGGGCCAAACCACCGATGTCTTAATAACCGCAAACCAACCACCTTCTCGATACTATATAGCTGCCCGTGCTTACCAATCTGCGCAAAACGCACCGTTTGATAACACTACAACCACCGCGATACTCCAATACCAcaattcaatcaaaacaaaaccaatcaTGCCACCACTCCCTGCTTATAATGACACCAATGCAGTTACTAAATTTAGTAGAAGTTTCTTTAGTCAAAGAGAAGTCGAAGTTCCAACCGAAATCGACGAAAATCTCTTTTTCACAATTGGTTTAGGACTCAACAATTGCCCaaaaaatttcagaaaaagAAGGTGTCAGGGTCCTAATGGAACACGCTTCGCTGCAAGTATGAACAATGTTTCTTTTACTCTTCCAAACAACATTTCAATTTTGCAAGCTCATTACGATAGAATTCCCGGAGTTTTCACCACTGATTTTCCCGCCAACCCACCTGTAAAATTTGATTACACCGGTAACGTGAGCCGTTCGCTTTGGCAACCTACTCCGGGGACTAAAGCTTATAGGTTGAAGTTCGGATCAAGGGTTCAGATTGTGTTGCAAGATACAAGTATTATCACTCCTGAGAATCACCCAATTCACCTTCATGGATATGATTTCTACATTGTTGCTGAAGGGTTTGGAAATTTTGACCCTAAGAAAGATACATCAAAATTCAACCTTGTTGATCCACCAATGAGGAATACAGTAGCTGTACCCGTCAATGGTTGGGCCGTTATCCGATTTGTTGCTGATAATCCagGTGCTTGGATTATGCATTGTCACTTGGATGTTCACATTGGTTGGGGTTTAGCCACTGTGCTATTAGTAGAAGATGGAGTTGGAGAATTGCAATCTATAGAGCCACCTCCACTGGACCTGCCTCTATGTTAG 1713 0.4209 MECVKTNSKYSSIFITIFILLLSPTLSFANPKTHEHEFVVEATPVKRLCKTHNTITVNGQFPGPTLEINNGDTLVVKVINKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYRFTVNGQEGTLWWHAHSSWLRATVYGALIIRPRQGDYYPFPNPTRDTPILLGEWWDRNPIDVVRQAQRTGAAPNISDAYTINGQPGDFYKCSTKGTTIIPIHSGETNLIRVINAALNQPLFFTIANHKLTVVGADASYLKPFTTNILMLGPGQTTDVLITANQPPSRYYIAARAYQSAQNAPFDNTTTTAILQYHNSIKTKPIMPPLPAYNDTNAVTKFSRSFFSQREVEVPTEIDENLFFTIGLGLNNCPKNFRKRRCQGPNGTRFAASMNNVSFTLPNNISILQAHYDRIPGVFTTDFPANPPVKFDYTGNVSRSLWQPTPGTKAYRLKFGSRVQIVLQDTSIITPENHPIHLHGYDFYIVAEGFGNFDPKKDTSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGAWIMHCHLDVHIGWGLATVLLVEDGVGELQSIEPPPLDLPLC 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01913 570 CDD CuRO_1_LCC_plant 36 152 IPR034288 GO:0005507
Tsu03g01913 570 SUPERFAMILY Cupredoxins 29 179 IPR008972 -
Tsu03g01913 570 ProSitePatterns Multicopper oxidases signature 2. 533 544 IPR002355 GO:0005507
Tsu03g01913 570 Gene3D - 371 570 IPR008972 -
Tsu03g01913 570 CDD CuRO_2_LCC_plant 168 314 IPR034285 -
Tsu03g01913 570 Gene3D - 22 152 IPR008972 -
Tsu03g01913 570 Pfam Multicopper oxidase 420 552 IPR011706 GO:0005507|GO:0016491
Tsu03g01913 570 Pfam Multicopper oxidase 166 316 IPR001117 -
Tsu03g01913 570 ProSitePatterns Multicopper oxidases signature 1. 528 548 IPR033138 -
Tsu03g01913 570 TIGRFAM laccase: laccase 32 570 IPR017761 GO:0046274|GO:0048046|GO:0052716
Tsu03g01913 570 Gene3D - 162 349 IPR008972 -
Tsu03g01913 570 SUPERFAMILY Cupredoxins 352 570 IPR008972 -
Tsu03g01913 570 CDD CuRO_3_LCC_plant 415 553 IPR034289 GO:0005507
Tsu03g01913 570 Pfam Multicopper oxidase 40 154 IPR011707 GO:0005507
Tsu03g01913 570 PANTHER LACCASE 9 570 - -
Tsu03g01913 570 PANTHER MULTI-COPPER OXIDASE 9 570 IPR045087 -
Tsu03g01913 570 SUPERFAMILY Cupredoxins 160 344 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01913 Tsu-Chr3 19836656 19840473 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01913 K05909 - gmx:547704 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01913 03 19836656 19840473 Tsu05g03382 05 45186297 45190151 ECH
Tsu03g01913 03 19836656 19840473 Tsu03g01913 03 19836656 19840473 ECH
Tsu03g01913 03 19836656 19840473 Tsu05g03382 05 45186297 45190151 PCT