Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01896 ATGACAAATTTATTCGAATCCCTCTTCAAAGACAGAAAGTTCCCTGTCATTTTCACCTTCTTTACATTGCTTATTTGTGTCACGACACTCTTCGTCATCAACACCACTACCTTCACCACCTCTGATCCGATTACCTTCTACCCCGATGATATAAAAGTGCAGCAACCGCTCGAACACAATGACCCTCCAGTACTCCCAGATTCAAAAGATCATCAAGAAGAACACCATGCCCCTCCAGTAGTCCAAGATTCAAAAGATCATCAAGAACTGCCAAAAGATCAGCAAGAACCGCCACCAAAGCGACATGAAGGACTGCTCCATTGGGAAAAGGCTTTTGACAATAATGTTTCTGTTGATCTGAATATGAATTGGAAGCTTTGCAAGGGTTCTGTGATGGTAGATTATATGCCATGTTTGGATAATCTTAAGGTCATTAAGGCTTTAAAGTCAAGGAGGCACATGGAGCACAGGGAAAGACATTGTCCTAAATCTGTTCCTCGTTGTTTGTTACCCCTTCCCAAAGGGTATAAAGTCAAGGTTGCATGGCCTAAGAGCAGGGACATGATTTGGTATGATAATGTACCTCATCCAAAGCTTGTTGAATACAAGAAGGAACAAAATTGGGTGGTGAAGTCGGGTGAATATCTTGTATTTCCAGGAGGTGGTACCCAATTCAAGGAAGGAGTTAACCATTATATTAATTTCATAGAGAAGACTCTACCAGCAATCCAATGGGGAAAGAATATAAGGGTTGTGCTCGATGCCGGTTGTGGAGTTGCTAGCTTTGGCGGATATCTTCTAGACAAGAATGTTATTACCATGTCATTTGCACCAAAGGATGAGCATGAAGCTCAGATACAATTTGCTTTGGAAAGAGGAATTCCAGCAACTCTTTCTGTCATTGGAACACAAAAGTTGACATTTCCTGATAATGGATTCGATTTGATCCATTGCGCAAGATGCAGGGTGCACTGGGATGCTGATGGTGGAAAGCCATTATTTGAACTCAATAGGATTCTTAGGCCTGGTGGTTACTTTGCATGGTCAGCTACACCAGTTTATCGCAATGATGAAAGAGATCAGAAAGTATGGAATGCCATGGTGACTATAACAACAGAAATGTGTTGGACTGTTGTGGCCAAGACTTTTGATTCATCTGGAATTGGACTTGTTATATACCAAAAGCCGACCACATCTTCCTGCTATGAGAAGCGCAAAAAGAACAACCCTCCtatatgtaaaaataatgaaaggAACCAAATCTCATGGTATACCAGACTGAGTAATTGCCTTATTCCTCTTCCCGTGGATGATGCCGCGAGATGGCCCGTGTCTTGGCCTAATAGGCTTACTAGTATACCTCCTAGCTTATCTTCTGAAGTAGATGCCGGAAACATGTTCGACAAGGATACTAAACATTGGTCTAGAATAGTTTCAGACATTTATATGGAAGCCCCTATAAATTGGTCTACTGTTCGAAATGTAATGGACATGAATGCCGGTTATGGAGGATTTGCTGCAGCTCTTATTGATCTACCAGTTTGGGTGATGAATGTAGTGCCAATTGATATGCCAGATACTCTTCCTGTCATATTTGATAGAGGCTTAATAGGAGCCTATCATGATTGGTGTGAATCCTTGAGTACCTATCCGCGCACATATGATCTTGTTCATTCAAGCTTCCTCTTCAAAAACCTTGACAAAAGATGTGACATTATAGATGTGGCTGTGGAGATAGATCGCATATTGAGACCAGATGGATATCTCTTGGTTCAGGATTCAATGGAAGCAATTAGAAAGTTGGGTTCAATATTGAATACACTTCATTGGTCTGTAACATCTTATCAAAATCAGTTTCTTGTTGGTAGGAAGAGCTTCTGGCGTCCAAAACCATAG 1896 0.4098 MTNLFESLFKDRKFPVIFTFFTLLICVTTLFVINTTTFTTSDPITFYPDDIKVQQPLEHNDPPVLPDSKDHQEEHHAPPVVQDSKDHQELPKDQQEPPPKRHEGLLHWEKAFDNNVSVDLNMNWKLCKGSVMVDYMPCLDNLKVIKALKSRRHMEHRERHCPKSVPRCLLPLPKGYKVKVAWPKSRDMIWYDNVPHPKLVEYKKEQNWVVKSGEYLVFPGGGTQFKEGVNHYINFIEKTLPAIQWGKNIRVVLDAGCGVASFGGYLLDKNVITMSFAPKDEHEAQIQFALERGIPATLSVIGTQKLTFPDNGFDLIHCARCRVHWDADGGKPLFELNRILRPGGYFAWSATPVYRNDERDQKVWNAMVTITTEMCWTVVAKTFDSSGIGLVIYQKPTTSSCYEKRKKNNPPICKNNERNQISWYTRLSNCLIPLPVDDAARWPVSWPNRLTSIPPSLSSEVDAGNMFDKDTKHWSRIVSDIYMEAPINWSTVRNVMDMNAGYGGFAAALIDLPVWVMNVVPIDMPDTLPVIFDRGLIGAYHDWCESLSTYPRTYDLVHSSFLFKNLDKRCDIIDVAVEIDRILRPDGYLLVQDSMEAIRKLGSILNTLHWSVTSYQNQFLVGRKSFWRPKP 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01896 631 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 462 596 IPR029063 -
Tsu03g01896 631 Gene3D Vaccinia Virus protein VP39 462 619 IPR029063 -
Tsu03g01896 631 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 158 367 IPR029063 -
Tsu03g01896 631 CDD AdoMet_MTases 252 346 - -
Tsu03g01896 631 Gene3D Vaccinia Virus protein VP39 225 424 IPR029063 -
Tsu03g01896 631 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 134 618 IPR004159 GO:0008168
Tsu03g01896 631 MobiDBLite consensus disorder prediction 57 101 - -
Tsu03g01896 631 PANTHER PMT16, PUTATIVE-RELATED 4 630 - -
Tsu03g01896 631 MobiDBLite consensus disorder prediction 63 101 - -
Tsu03g01896 631 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 630 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01896 Tsu-Chr3 19614026 19617509 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01896 - - mtr:MTR_3g071530 1146.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01896 03 19614026 19617509 Tsu03g01896 03 19614026 19617509 ECH
Tsu03g01896 03 19614026 19617509 Tsu05g03366 05 45043151 45046718 PCT