Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01829 ATGGTTGATTTACATTGGAAATTAAACATGCCAAATTCAGACATGTCTTCCAAATCTCCAAAACTTTCACTCTCCGAAAAATCCTCACCACGTAAATCCCTACCCTCATTACAACTACCTTCAATCACCAACGACATCGCCACGGCGGCACCACCTCTTTGTGCAGCTTACGACCACTATCTCCGTCTCCCGGAGCTTCGCAAGCTTTGGGAATCAACAGAATTCCCCAACTGGAACAACGAACCAATCATAAAACCAGCTTTACAAGCACTAGAAATCACGTTCCGTTTCATCTCTACGGTTCTCTCTGACCCAAGACCCTACGCGAACCGTACGGAATGGAACCGTAGACTTGAATCCATCGCCACGCGTCAGATTGAGATTATCGCCATGTTATGCGAAGACGAGGAACAAAACCCGGAGACACGTGGCACAGTACCAACCGCTTATCTCAGCAGCGGTGATAGCAAAATCAGAAGCTATAGTGAAATGAGTCTTCTTCCAATTCTTGCCACGTGGTACAAATCAAAGGACGTAGCACAGAGGATTCTTCTCTCCGTGGAGTGTCAAATGATGAGATGTTCTTATACGTTAGGTTTGGGTGAACCGAACCTCGCTGGTAAACCGAGCCTAAAATACGACACCGTTTGTAAACCGAACGAAGTTCACGCTCTTAAAACGACGCCGTACGATGACAGAATCGAAAACTACGAGAATCACGCGGTGCATGCGACGCACCAGATCGTGGAATCGTGGATCCACGTTTCACGGAAGCTTCTAGAAAGAATCGTTGAAGAAATCGAAGGAAAAAGTTTAGAGAAAGCAACGGAAGATTGTTACACGGTGGAGAGGATCTGGAAGCTTCTAACGGAGGTTGAAGATATTCATCTGATGATGGATCCAGGCGATTTCTTGAAGCTGAAGAATCAATTAGCTATGAAATCAACTCACTACGAAACGGCGGCGTTTTGCATGAGATCTAAGGAGTTGGTTGAAGTAACAAAGATGTGTAGAGATTTGAGGCATAGAGTGCCGGAGATATTGGAAGTGGAGGTGGATCCGAAAGGTGGACCAAGGATTCAAGAGGCGGCGATGAAGCTTTACGTGGCGGAGAAAATGAGTGGATTCGAGAAGGTTCATTTGTTGCAGGGTATGCAAGCTATTGAGGTTGCTatgaagagatttttctatGGTTACAAACAGGTTTTGACGGTGGTAATGGGAAGTTCTGAAGCTAATGGAAACCGAGTTGGGTTGAGTTGTGATGGCGGTGACTCGTTGACTCATATGTTCCTTGAACCTACCTACTTTCCAAGCTTGGATGCTGCTAAGACTTTTCTTGGATACTTTTgggataatgataataaatggGTGTGA 1377 0.4452 MVDLHWKLNMPNSDMSSKSPKLSLSEKSSPRKSLPSLQLPSITNDIATAAPPLCAAYDHYLRLPELRKLWESTEFPNWNNEPIIKPALQALEITFRFISTVLSDPRPYANRTEWNRRLESIATRQIEIIAMLCEDEEQNPETRGTVPTAYLSSGDSKIRSYSEMSLLPILATWYKSKDVAQRILLSVECQMMRCSYTLGLGEPNLAGKPSLKYDTVCKPNEVHALKTTPYDDRIENYENHAVHATHQIVESWIHVSRKLLERIVEEIEGKSLEKATEDCYTVERIWKLLTEVEDIHLMMDPGDFLKLKNQLAMKSTHYETAAFCMRSKELVEVTKMCRDLRHRVPEILEVEVDPKGGPRIQEAAMKLYVAEKMSGFEKVHLLQGMQAIEVAMKRFFYGYKQVLTVVMGSSEANGNRVGLSCDGGDSLTHMFLEPTYFPSLDAAKTFLGYFWDNDNKWV 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01829 458 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 1 456 - -
Tsu03g01829 458 Gene3D - 211 446 - -
Tsu03g01829 458 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 213 447 IPR037217 GO:0019441|GO:0020037|GO:0046872
Tsu03g01829 458 MobiDBLite consensus disorder prediction 11 36 - -
Tsu03g01829 458 Pfam Hs1pro-1 N-terminus 1 188 IPR009869 GO:0006952
Tsu03g01829 458 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 456 IPR038759 -
Tsu03g01829 458 Pfam Hs1pro-1 protein C-terminus 191 453 IPR009743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01829 Tsu-Chr3 18855009 18857523 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01829 - - gmx:547603 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01829 03 18855009 18857523 Tsu03g01829 03 18855009 18857523 ECH
Tsu03g01829 03 18855009 18857523 Tsu05g03314 05 44452902 44455044 PCT