Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01799 ATGACGGAAGATCGGAGCGTGAAACAAAATCGCGTCGTTGACGTGGTCTTAGACTGTGTAATACCATACATCGACGATCCAAAAGACCGTGACGCAGTTTCTCAAGTTTGTCGGCGATGGTACGAACTCGATTCGTCAACTCGGAAACACGTTACGATTGCTCTGTGTTACACCACAACACCGTGGCGTCTCCGGCGTCGGTTTCCGCATCTTGAATCACTGAAACTGAAAGGGAAACCTAGAGCTGCGATGTTCAATTTGATTCCTGAAGATTGGGGAGGTCATGTTACGCCTTGGATTAAAGAAATTTCTCAGTATTTTGATTGTTTAAAGAATCTTCACTTCCGTCGTATGATTGTTCAAGATTCCGATCTTAAGCTTCTTGCTCGTACACGTGGTCATGTTCTTCAGTCTCTTAAGCTTGATAAGTGTTCTGGATTTTCTACTCATGGTCTTAGCTTTATTGCTCGCTTTTGCAGGAACttaaaagtttttcttttggAGGAAAGTACAATTGTGGAGAACGATGGCGAATGGCTACATGAGCTTGCTTTGAATAATACGGTTCTTGAGTCTCTAAATTTTTACTTGACTGATATTGTTCATGTCAAAGTTCAGGACCTCGAGCTTTTAGCCAAAAATTGCCCCAACTTGGTGTCTGTGAAAATTACTGATTGTGAAATCTTGGATCTTGTGAACTTTTTCCGCAATGCAACTGCTCTGGAAGAATTTTCTGGAGGCACCTACAATGAGGAACCTGAAAGATACACTGCTGTATCATTACCAGCAAAGTTATGTCGATTGGGTCTAACATATATTGGGAAAAATGAGTTACCAATAGCATTCACGTTTGCAGCTGCACTGAAAAAATTGGATCTCCTCTATGCCTTGCTAGATACAGAGGATCATTGTATGTTGATCGAAAAGTGCCCAAATTTAGAAGTCCTCGAGACAAGGAATGTAATTGGAGATAGAGGATTGACGGTTCTTGGTAATTGTTGTAAGAAGTTAAAAAGACTTAGGATTGAACGAGGTGATGATGATCAAGGAATGGAGGATGTAGAAGGTTCTGTTTCCCACAGAGGACTAATTGCTTTATCACAGGGCTGTACAGAACTTGAATATATGGCTGTTTACGTGTCCGATATTACAAATGCATCTCTGGAACATATTGGCACTCACTTGAAGAACCTTTGTGATTTTCGCCTTGTCTTGCTTGATCATGAAGAGAAAATATCGGATCTGCCGCTTGACAACGGGGTGAGGGCTCTGCTGACGGGGTGTGACAAGCTTAAAAGGTTTGCACTATATCTGCGGCGTGGTGGCTTGACTGATGTTGGTCTTGGTTACATTGGGCAATACAGTCAAAATGTGAGGTGGATGCTGTTAGGTTACGTGGGGCAAACTGATGCAGGTCTTTTGGAATTCGCAAAGGGCTGTCCTAATCTTCAGAAACTTGAAATGAGAGGGTGTTCCTTTTTCAGTGAGCATGCGCTCGCTGTTGCTGCAACACAATTGTCTTCTCTTAGGTACTTGTGGGTTCAAGGGTATGGTGCATCTCCATCTGGACGTGATCTTTTGGCGATGGCTCGCCCCTTTTGGAATATTGAGTTGATTCCTTCTAGATGGGTTaccattaataataataataatatcgaTGAGCCTAGGGTTGTTGTTGATCATCCAGCTCATATTCTTGCATACTACTCTCTTGCTGGCCAAAGATCCGATTTTCCAGATACTGTTGTACCTTTGAATCCTGGAGAATATTTGCAGTTTCATGTCTAG 1788 0.4178 MTEDRSVKQNRVVDVVLDCVIPYIDDPKDRDAVSQVCRRWYELDSSTRKHVTIALCYTTTPWRLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGHVTPWIKEISQYFDCLKNLHFRRMIVQDSDLKLLARTRGHVLQSLKLDKCSGFSTHGLSFIARFCRNLKVFLLEESTIVENDGEWLHELALNNTVLESLNFYLTDIVHVKVQDLELLAKNCPNLVSVKITDCEILDLVNFFRNATALEEFSGGTYNEEPERYTAVSLPAKLCRLGLTYIGKNELPIAFTFAAALKKLDLLYALLDTEDHCMLIEKCPNLEVLETRNVIGDRGLTVLGNCCKKLKRLRIERGDDDQGMEDVEGSVSHRGLIALSQGCTELEYMAVYVSDITNASLEHIGTHLKNLCDFRLVLLDHEEKISDLPLDNGVRALLTGCDKLKRFALYLRRGGLTDVGLGYIGQYSQNVRWMLLGYVGQTDAGLLEFAKGCPNLQKLEMRGCSFFSEHALAVAATQLSSLRYLWVQGYGASPSGRDLLAMARPFWNIELIPSRWVTINNNNNIDEPRVVVDHPAHILAYYSLAGQRSDFPDTVVPLNPGEYLQFHV 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01799 595 SUPERFAMILY RNI-like 271 528 - -
Tsu03g01799 595 Gene3D - 2 48 - -
Tsu03g01799 595 Gene3D Ribonuclease Inhibitor 49 588 IPR032675 -
Tsu03g01799 595 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 10 588 - -
Tsu03g01799 595 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 10 588 - -
Tsu03g01799 595 SUPERFAMILY RNI-like 87 343 - -
Tsu03g01799 595 Pfam Transport inhibitor response 1 protein domain 69 115 IPR041101 -
Tsu03g01799 595 Pfam F-box 10 50 IPR041567 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01799 Tsu-Chr3 18525337 18528342 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01799 K13463 - gmx:732662 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01799 03 18525337 18528342 Tsu03g01799 03 18525337 18528342 ECH
Tsu03g01799 03 18525337 18528342 Tsu05g03286 05 44202035 44206623 PCT